Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3476 |
Symbol | |
ID | 3905210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4145499 |
End bp | 4146308 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880798 |
Product | UDP-3-O-(3-hydroxymyristoyl)-like |
Protein accession | YP_482558 |
Protein GI | 86742158 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCTC ACCTGCGCTC GCTGGTCATC GTGGGCGCGG GAGGGCACGG CCGGGAGCTG CTCGATCTGG TGGAGGCGGT CAACGCGGCC ACCGAGGGTC CCCGCTACGA CATCCTCGGC TTCGTCGATG ACGACCGTGT GGACCCGGAT CCACTCGCCC GGCGCGGAGC CGTGCTCCTC GGTGGACTCG ACCTACTCGA TCGACTTGAC GCCGACTACC TGATCGGCTT CGCCGACGCG GCCACCCGGT CCCGCGTCGA CCGGTACGCC AGCGCCCGCG GCCGACGACC GGCGACCCTC GTCCACCCCC GGGCCAGCGT CGGAGGTGAC GTGAAGCTCG GGCCGGGTAC CGTCGTCTGT GCTCTCGCCA GCATCACCAC CAACGTCGAA ACCGGTCGGC ACGTAGTGGT GAACATCGGC GCCAGCGTGG CGCACGACTG CCGCCTGGGT GACTACGTCA CGGTCGCGCC GGGGGCCCGG CTCTCCGGTG CGGTGGCCGT CGGCGCGCGG GCGTGGATCG GCGCGCAGGC GAGCATCGTC GGCCTGCGCA GCATCGGCGA CGGGGCGGTT GTGGGAGCTG GGTCCGTCGT CACCGATGAC ATCCGGGCCG CGCAGGTCGT CGCCGGGGTG CCCGCCCGGC CGATCCACGT CGCACCCGAG CACGTCGCAC CCGAGCACGT CGCACCCGAG CACGTCGCAC CCGAGCACGT CGCACCCGAC CAGCCGCAAC CCGAGTCGGG TGGGGCACGC ACGACGGCGA GGCTCGCCAA ACCTCCGCCC AGTCAGCGGG GCGCCCCACC GTGCGGCTGA
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Protein sequence | MPAHLRSLVI VGAGGHGREL LDLVEAVNAA TEGPRYDILG FVDDDRVDPD PLARRGAVLL GGLDLLDRLD ADYLIGFADA ATRSRVDRYA SARGRRPATL VHPRASVGGD VKLGPGTVVC ALASITTNVE TGRHVVVNIG ASVAHDCRLG DYVTVAPGAR LSGAVAVGAR AWIGAQASIV GLRSIGDGAV VGAGSVVTDD IRAAQVVAGV PARPIHVAPE HVAPEHVAPE HVAPEHVAPD QPQPESGGAR TTARLAKPPP SQRGAPPCG
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