Gene Francci3_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3476 
Symbol 
ID3905210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4145499 
End bp4146308 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content73% 
IMG OID637880798 
ProductUDP-3-O-(3-hydroxymyristoyl)-like 
Protein accessionYP_482558 
Protein GI86742158 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCTC ACCTGCGCTC GCTGGTCATC GTGGGCGCGG GAGGGCACGG CCGGGAGCTG 
CTCGATCTGG TGGAGGCGGT CAACGCGGCC ACCGAGGGTC CCCGCTACGA CATCCTCGGC
TTCGTCGATG ACGACCGTGT GGACCCGGAT CCACTCGCCC GGCGCGGAGC CGTGCTCCTC
GGTGGACTCG ACCTACTCGA TCGACTTGAC GCCGACTACC TGATCGGCTT CGCCGACGCG
GCCACCCGGT CCCGCGTCGA CCGGTACGCC AGCGCCCGCG GCCGACGACC GGCGACCCTC
GTCCACCCCC GGGCCAGCGT CGGAGGTGAC GTGAAGCTCG GGCCGGGTAC CGTCGTCTGT
GCTCTCGCCA GCATCACCAC CAACGTCGAA ACCGGTCGGC ACGTAGTGGT GAACATCGGC
GCCAGCGTGG CGCACGACTG CCGCCTGGGT GACTACGTCA CGGTCGCGCC GGGGGCCCGG
CTCTCCGGTG CGGTGGCCGT CGGCGCGCGG GCGTGGATCG GCGCGCAGGC GAGCATCGTC
GGCCTGCGCA GCATCGGCGA CGGGGCGGTT GTGGGAGCTG GGTCCGTCGT CACCGATGAC
ATCCGGGCCG CGCAGGTCGT CGCCGGGGTG CCCGCCCGGC CGATCCACGT CGCACCCGAG
CACGTCGCAC CCGAGCACGT CGCACCCGAG CACGTCGCAC CCGAGCACGT CGCACCCGAC
CAGCCGCAAC CCGAGTCGGG TGGGGCACGC ACGACGGCGA GGCTCGCCAA ACCTCCGCCC
AGTCAGCGGG GCGCCCCACC GTGCGGCTGA
 
Protein sequence
MPAHLRSLVI VGAGGHGREL LDLVEAVNAA TEGPRYDILG FVDDDRVDPD PLARRGAVLL 
GGLDLLDRLD ADYLIGFADA ATRSRVDRYA SARGRRPATL VHPRASVGGD VKLGPGTVVC
ALASITTNVE TGRHVVVNIG ASVAHDCRLG DYVTVAPGAR LSGAVAVGAR AWIGAQASIV
GLRSIGDGAV VGAGSVVTDD IRAAQVVAGV PARPIHVAPE HVAPEHVAPE HVAPEHVAPD
QPQPESGGAR TTARLAKPPP SQRGAPPCG