| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3473 |
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| Symbol | |
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| ID | 3905207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4141243 |
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| End bp | 4143243 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880795 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_482555 |
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| Protein GI | 86742155 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.467717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGAC GTAGAGTAGA CGGAGTGGGT CATGGTCGGT GGACAGCGCA CATCGCACGG
CGCGTCTCCC GGCTCAACCT CCGTCAGCGG GTCGGCCTGC AGATCACTCT GGACAGTGCG
GCGCTGGTCC TGGGCCTCAT CTCGGCCCAG ATCGGCCGCC TGGACTTCAC GCTCGGCGCG
CTGAGCGATC TCGGCTTCTG GGTCATCTGC ACGCTCGCCG TCTGCGTGCT CCACTTCCTG
GGCACCGCCC TGCACCTCTA CCTGGGGCGC TACCGCTTCG GCGGCTTCGA GGAGGTCCTC
GGCCTGCTCG TGTCGGTCCT GCTCACGGTC GTCAGCGTGG CCGTCGTCAT CGCCGCGTTC
GGCTCCCCGA GACCCGTCCC GCTGAGCGTG CCGCCACTGG GCGGCGCGGT GGCCCTGGTC
GTGATGTTCG GCATCCGCTA CCTCTGGCGG CTGACCGAGG AACACCTCCG TCGGCCGAGC
AGGGAGCACG CCGAACCGCT CCTCGTGTTC GGCGCCGGTG ACGGGGCTGA ACGGGTACTG
GCGGCCATGC TGCGCACCCG GAACAGTCCT TACTACCCGG TCGCGCTGCT CGACGACGAC
CCGAGCACAC ACAACCTCCA GCTACTCGGG GTCCGGGTAC GTGGTGGCCG GGAGCGAATC
GGCGCCGTCG CCGAGTCGAC CGGGGCCAGG ACCCTGCTCG TGGCGATCCC CAGCGCTGAC
GGCCCACTGC TGCGGGAGAT CAGCGCAATC GCCGAGGGCG CCGGGCTGAC CGTGAAGGTG
CTTCCCCGCG TCGCGGACCT GATCGACGGG CGGGTCGGCG TCGGGGACAT CCGCGACCTC
GACCTCGCCG ACCTCCTCGG CCGGCGGCAG ATCCGCACCG ACATGTCCGC CGCCGCGAGC
TACCTCGCGG GCCGACGGGT GCTCGTGACG GGGGCGGGCG GATCGATCGG TTCGGAGCTG
TGCCGTCAGA TCTCCGGCTA CGGGCCGGCC GAACTGATCA TGCTGGACCG GGACGAGTCG
GCACTGCGCG CGGTGCAGCT GTCGATCTCC GGCCGGGCGA TGCTCGACGA CGACGCCATC
GTGCTGGGCG ACATCCGCGA CATCGACCTG ATGACCACGC TGTTCACGGA GCGCCGGCCC
GAGGTCGTCT TCCACGCCGC CGCGCTCAAA CACCTCCCGC TGCTCGAACG CTTCCCCGGC
GAGTCGGTGA AGACCAACGT CTGGGGCACT CTGACGATCC TGGAGACGGC CGTGGCCTGC
GGCGTCGACC GGCTGGTCAA CATCTCCACG GACAAGGCGG CGAACCCGAC GAGCGCCCTC
GGCTACTCGA AGCGGATCAC CGAGCGGCTC ACCGCGTGCC TCGCCCGCCG GGCCCGCGGA
ACGCTGGTCA GCGTCCGGTT CGGCAACGTC CTGGGCAGCA ACGGCTCCGT CCTGACCGTC
TTCGCCGGCC AGCTGGCCGC CGGCGGGCCG ATCACCGTCA CCCACCCCGA GGTCACCCGG
TACTTCATGA CCATCCACGA GGCGGTGCAA CTGGTCCTGC AGGCCGGGGC GCTGGGATCA
CCCGGCGAGG CCCTCGTGCT CGACATGGGC GAGCCGGTGC GCATCGCGGA CGTGGCCGCC
CGGCTCGTGG CTCGGGAGAA CCGGCCGATC GAGATCGTCT ACACCGGGCT CGGCCCCGGC
GAGAAGCTCC ATGAGGAGCT CCTCGGTGCG GGCGAGGACG ACCATCGACC ACACCACCCG
CTGATCTCGC ACGTGGACGT GCCCGCCCTG GACCCGACCC ACGCCCTCGC CCTCGATCCC
TGGGCCCCGC CGGAGGAGGT GCTGGCCGAA CTCGCGGCCC TCGCCGGCGC GGACGCCGCG
GCGGACGAGG TCCCGGCAGG CGCGGACCGA CCCGGGGACG GGGGCGCGAC CGCAGGCGGA
CCCCTGGCCG CCGCGGACGT GACCGGGCGG ATTCCCGTCC AGCCCACGGC GTCCAACCAT
CAACCGCATC CGGCCCGGTG A
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| Protein sequence | MWRRRVDGVG HGRWTAHIAR RVSRLNLRQR VGLQITLDSA ALVLGLISAQ IGRLDFTLGA
LSDLGFWVIC TLAVCVLHFL GTALHLYLGR YRFGGFEEVL GLLVSVLLTV VSVAVVIAAF
GSPRPVPLSV PPLGGAVALV VMFGIRYLWR LTEEHLRRPS REHAEPLLVF GAGDGAERVL
AAMLRTRNSP YYPVALLDDD PSTHNLQLLG VRVRGGRERI GAVAESTGAR TLLVAIPSAD
GPLLREISAI AEGAGLTVKV LPRVADLIDG RVGVGDIRDL DLADLLGRRQ IRTDMSAAAS
YLAGRRVLVT GAGGSIGSEL CRQISGYGPA ELIMLDRDES ALRAVQLSIS GRAMLDDDAI
VLGDIRDIDL MTTLFTERRP EVVFHAAALK HLPLLERFPG ESVKTNVWGT LTILETAVAC
GVDRLVNIST DKAANPTSAL GYSKRITERL TACLARRARG TLVSVRFGNV LGSNGSVLTV
FAGQLAAGGP ITVTHPEVTR YFMTIHEAVQ LVLQAGALGS PGEALVLDMG EPVRIADVAA
RLVARENRPI EIVYTGLGPG EKLHEELLGA GEDDHRPHHP LISHVDVPAL DPTHALALDP
WAPPEEVLAE LAALAGADAA ADEVPAGADR PGDGGATAGG PLAAADVTGR IPVQPTASNH
QPHPAR
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