| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3456 |
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| Symbol | |
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| ID | 3905696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4116418 |
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| End bp | 4120326 |
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| Gene Length | 3909 bp |
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| Protein Length | 1302 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880779 |
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| Product | ABC transporter related |
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| Protein accession | YP_482539 |
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| Protein GI | 86742139 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.66499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGACG TCATGGGCTA CGCCCTGCTC AGTCTGGGCA CGGGCGCGCT CTACGCCCTC
GTGGCCTCGG GTGTGGTGGT CATCGCCCGC GGGGCCGGCG TGCTCAACCT GGCCCAGGGC
GCGCTGCTGG CCTGGGCGGC CTATGCCTTC CATGGGCTGC ACGCCGGGTG GGGGCTGCCG
CTCGGCCTCG CGGCGCCGCT GGCCGTGCTG TCGACGACCG TCATCGGGGT CGTGTTCCAC
CTGCTGGTGA TGCGGCCACT GCGCGAGGCG ACCTCGCTGC TGCGGCTGAT GGCGACGCTC
GGCCTGCTGA TCATCTTGCA GTCGTTGCTG ACGCTGATGT TCGCCGGTGC CGTGCGTACC
TCCCCGACGG TGCTGCCGAC CGGCAGGATA ACGCTGTTCG ACGAGCCCGT CGGCGTGTCC
GTGTTCGTCC GGCTGGCTGT GGTCGCCGTG CTGGTCGCGG GGCTCTGGGC GGTGTTCCGG
TTCACCACGG TGGGCCTCGC CGCGACGGTG GCGGCGGAGA ACCTCAGGGC CGCCGCGACC
TTCGGCTGGT CGGCGGACAC CGTCGCCGCC GCTGCCTGGG GCGCCGGCAG CGCGCTGGCC
GGTCTCGGCG GGGTCCTGCT CGCGCCGCTG CAGAACCCGT TGTCCTCGGC GAACCTGCTC
CTGCTCATCG TCCCGGCGCT GGCGGTCGCG CTGGTCGCGC GGTTTCGCTC CTTCCCGATG
GTGCTGGCGG GCGGGCTCGC CCTCGGGGTC GTCGAGGTGG AGACCCAGTT CCAGCTGGTC
GCCGAGCACC CCTGGTGGCG CGGGGTCGAC CGGGCTGTGC CGCTGGCGGT CATCGTCTTC
TACCTCGCGA TCCGCGGGCA GGGAATACCC GAACGCGGCC ACCTCGCCGA ACGTCAGCCT
GCCCTCGGTA GCGGCCGGGT GCATCCGCGC GCCCTCGCGG TCACCGTGGC GGCCACCCTG
GCGGCGATCT GGTGGCTGCT GCCGGTTGAC TGGGTCGACG CGATCGACGC GAACGCCCTG
TGGGCGCTGG TCATCCTGTC CGTCGTCGTG CTCGTCGGGT TCACCGGGCA GTTGTCCCTG
GCGCAGCTCG CCTTTTCCGG CATCGCGGCG TTGATCGCCG GACGGCTCGT CGCGACCCGC
GGCTGGCCGT TGGAGGCGGC CATGCTCGTC GGGGTCGCCG GCACGGCCGC GGTCGGACTG
TTGTTCGCCC TGCCGGCGCT GCGGACCCGG GGCCTGCAGC TCGCGGTGGT GACCCTGGGC
CTGGGCACCG CCGTCGACGC TCTGCTGTTC CAGCGCGGCT ACCACTCCCC GGCACCGAGG
AGCGCGGGCT CCATCGGTTC GCTGTTCGGC GATCTGGCCT CCCCGGAGGG CACGGTCGTC
GGCCGTCAGA CATTCCTCGG CATCGAGTTG GACAAGGTTG CCAACCCCCG CGGGTTCGCG
ACCGTCTCCG TCCTCGCCTT CGTCCTCGTC GCGCTGGCCG TCGCCAACCT GCGGCGCGGG
CGCGCGGGCC GGCGACTGAT CGCGGTGCGG ACCAACGAGC GGGCCGCCGC CGCGCTCGGC
ATCAGCGTGG TCGGCGCGAA GCTCTACGCC TTCGCGCTGT CGGCGGCCAT CGCCGGATTC
GGCGGGGTGC TCTATGCGTT CTACGTCTAC GGGGAGCGCG GGAACATCGA CTATGGCGGT
GGCGCCTTCG CGCCGTTCTC GTCGATCATG CTCATCGCCT ACGCGGTGCT CGGCGGGGTC
GGCTGGGTCA GCGGGGCGTT CGCCGGGGCG ACGATGGCCG CCGGGGCGCT CGCGACCCGG
CTCGGCGGCT GGGTCGGCGA CCTGCTCGCC CGGCTCGGCG TGCTGCTGCG GGTCGTCGTG
GCGGCCCTCG CCGGGCTGCT CGGCCTCGCC GCCGGTGCCT CGCTCGTCAG CGCGCCGCGC
CCGCGCCGCC GGCTCGGCGC CGCCGCCCGG TACGCCCCCT GGGCCGTCGC CGCCGTCGCC
GCCCTGGTCG CAGCGGTCTT CGGCGGCTGG GTGCGGGACT GGCTGGCCGA GCTCGACCGC
TACGTGCCGC TGATCGGCGG GATCGTCCTC GTCGTCGTGC TGTCCCGGTC GGGTGGGGGC
ATGGCGCCGG AGAACGCCCG CACCGCCAGG CTGCTCCACG ACCGGGTCCC GGCGGCGGCC
GCCCGCCGCC GTCGCCGCGA TGCCGCCCGC CTGGCCCGCC TGCTCGGCGC GCCGCCCGCC
GCGCTGCCCG CCGTGCCCGC CGTCCTGTCG GTCTGGGGTC TGACGGTCCG GTTCGGCGCG
GTCACCGCGG TGCGCTCGGT CGACCTGCGG GTGGAACCCG GTCAGATCGT CGGGATGATC
GGCCCGAACG GCGCGGGCAA GACGACGGTC ATCGACGCGA TCACTGGTTA CACCCCGTCC
TCGGTCACGT CGGTCACGTC GATGACGTTG GGCGGCGTCC GGCTGGACCG TCTGCCGGCG
CACCGGCGGG CCCGCGCCGG CATCAGCCGG TCGTTCCAGA ACCTGGAGCT GTTCGACGAT
CTGACGGTCA TCGAGAACAT CCAGGCGGCC AGCGACCGCC GGGACACCCG CGCCTATCTC
ACCGACCTGC TGTTCCCCCG GGGACGTCCG CTTGAGCCGG CCGCGGTCGC CGCGGTCGAC
GCCTTCGGGC TGCGCGACGA TCTCCTGCGC ACCGTGGCGG AGCTTCCCTA CGGTCGTCGT
CGGCTGCTGG CCATCGCCCG GGCCGTCGCG GCGCGCCCCG CCGTGCTGCT GCTCGACGAG
CCGTGCGCCG GGCTGGACGA ATCGGAGAGC GCGGAGGTCG CGGGCCTGCT GCGTCGGCTC
GCCGACGACT GGGGACTGGG CATCCTGCTC AACGAACACG ACATGGACGT GGTCATGGGG
GTCTGCGACC GGGTGGTCGT GCTGGACGCC GGGGAGCGCA TCGCCGAGGG GACGCCGGAG
CGGGTGCGCG ACGACCCCCG GGTGCGGGTC GCCTGCCTGG GGGAGGCGGC GGTCCCGGCC
CGGCCGGCCG TCTCCTGGAC TCGGCCGGCC GTCTCCTGGA CCCGGCGGGC CGTCTCCTGG
ACCCGGCGGG CCGTCTCCTG GACCCGGCCG GCCGGCCCGT CCGCGGGCGG GACCGGGGAC
CGCGTCGCCG ACAGGACGGA CCCGGCCCGG TTCGCGGCCG GCCCCGCGGT GCTGGCGGCG
CGGGGCCTGT CCGCCGGCTA CGGCAACGGC CCGGTGGTCC GCGACCTCAA CCTGGAGGTT
CACGCCGGCG AGGTCGTGAC CCTGCTCGGC CCGAACGGCG CCGGCAAGAC GACGACACTG
CTGGCGCTGG CCGGCGCGAT CCCGTCGGCG GGAGGCGAGG TCCTGCTCGC CGGGGCCGTG
ACGACCGCCG CGCTGCACGA ACGGTGCCGA CGTGGCCTGA GCCTGGTTCC CGAGGAACGC
TCGGTCATCA TGGACCTCAC CGTCCGGGAG AATCTCCGGG TCGGTCGATG CGACCCGGAC
CTCGCCCTCG CGGTCTTCCC CGAGCTTGCC GAGCACCTCG ATCGGCGGGC GGGGCTGCTC
TCCGGGGGGC AGCAGCAGAT GGTGACCCTC GCGCGCGCCT TGGCGCGCCG GCCCACGGTT
CTGCTCGCCG ACGAGCTCTC GCTGGGCCTC GCGCCGCGCG TCGTGGACCG TCTGCTGGCG
GCGGTGCGCG CCGCCGCGGA CGATGGGCTC GCCGTGATCC TCGTCGAGCA GCACGTCCGC
AGCGCCCTGT CGATCGCCGA TCGGGTGCAC GTCCTGCGGC ATGGGGCCCT CGCCTGGTCG
GGCACCGCCG CCCAGGCCCG TGCCGACCGG GAGACCCTGC TCGGCGCCTA TCTGTCACCC
GGACGGCCGG CGGACTCCGG CAATGGCGCC CCATCCGGCA ATGGCGCCCT CAGCGGCCCG
CGTGCCTGA
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| Protein sequence | MNDVMGYALL SLGTGALYAL VASGVVVIAR GAGVLNLAQG ALLAWAAYAF HGLHAGWGLP
LGLAAPLAVL STTVIGVVFH LLVMRPLREA TSLLRLMATL GLLIILQSLL TLMFAGAVRT
SPTVLPTGRI TLFDEPVGVS VFVRLAVVAV LVAGLWAVFR FTTVGLAATV AAENLRAAAT
FGWSADTVAA AAWGAGSALA GLGGVLLAPL QNPLSSANLL LLIVPALAVA LVARFRSFPM
VLAGGLALGV VEVETQFQLV AEHPWWRGVD RAVPLAVIVF YLAIRGQGIP ERGHLAERQP
ALGSGRVHPR ALAVTVAATL AAIWWLLPVD WVDAIDANAL WALVILSVVV LVGFTGQLSL
AQLAFSGIAA LIAGRLVATR GWPLEAAMLV GVAGTAAVGL LFALPALRTR GLQLAVVTLG
LGTAVDALLF QRGYHSPAPR SAGSIGSLFG DLASPEGTVV GRQTFLGIEL DKVANPRGFA
TVSVLAFVLV ALAVANLRRG RAGRRLIAVR TNERAAAALG ISVVGAKLYA FALSAAIAGF
GGVLYAFYVY GERGNIDYGG GAFAPFSSIM LIAYAVLGGV GWVSGAFAGA TMAAGALATR
LGGWVGDLLA RLGVLLRVVV AALAGLLGLA AGASLVSAPR PRRRLGAAAR YAPWAVAAVA
ALVAAVFGGW VRDWLAELDR YVPLIGGIVL VVVLSRSGGG MAPENARTAR LLHDRVPAAA
ARRRRRDAAR LARLLGAPPA ALPAVPAVLS VWGLTVRFGA VTAVRSVDLR VEPGQIVGMI
GPNGAGKTTV IDAITGYTPS SVTSVTSMTL GGVRLDRLPA HRRARAGISR SFQNLELFDD
LTVIENIQAA SDRRDTRAYL TDLLFPRGRP LEPAAVAAVD AFGLRDDLLR TVAELPYGRR
RLLAIARAVA ARPAVLLLDE PCAGLDESES AEVAGLLRRL ADDWGLGILL NEHDMDVVMG
VCDRVVVLDA GERIAEGTPE RVRDDPRVRV ACLGEAAVPA RPAVSWTRPA VSWTRRAVSW
TRRAVSWTRP AGPSAGGTGD RVADRTDPAR FAAGPAVLAA RGLSAGYGNG PVVRDLNLEV
HAGEVVTLLG PNGAGKTTTL LALAGAIPSA GGEVLLAGAV TTAALHERCR RGLSLVPEER
SVIMDLTVRE NLRVGRCDPD LALAVFPELA EHLDRRAGLL SGGQQQMVTL ARALARRPTV
LLADELSLGL APRVVDRLLA AVRAAADDGL AVILVEQHVR SALSIADRVH VLRHGALAWS
GTAAQARADR ETLLGAYLSP GRPADSGNGA PSGNGALSGP RA
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