Gene Francci3_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3454 
Symbol 
ID3905694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4114162 
End bp4114926 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID637880777 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_482537 
Protein GI86742137 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.742849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATC CGGGACGAGG AGGGGTAGTG GGAGACACAT TCGGCATGTT CCAACCGGGT 
GCCAGCAACG GCGAACCGAG GAGCGGGCGC AGCCAGACGG TCGGTACGGA TCCCGTCTCC
GGGCTGCCCA GCCGGGTCTC GGCGCACCGT TCGCCCGACA TGCCGCCGGA CGGTCCCGGT
CCGGTGCGGG CCCGTCGCCG CCGCCCGTTA ATCGTCGGCA TCGGTGGCAG CAGCCGGGCG
AACTCCACCA CCCACCAGGC CCTGGCGACG GTGCTGGCGA TGATGGGGCA GGCCGGCGCG
GAGACGATGC TGCTCGGTGC GGCGGACCTG GACCTGCCGA TGTACGCGCC GGAACGCCAG
GAACGTCCCG CCGCCGCGCT GCGCCTCCTC GCCGCCGTCG AACGGGCCGA CGGCCTCGTG
ATCGCGACTC CCGGCTACCA CGGCGGGATA TCGGGCCAGG TCAAGAACGC CCTGGACTAT
CTGGAGGACC TGCGCGGCGC GCCCCGGCCC TACCTGGACG GCCGGGCGGT CGCACTGATC
GTCGGCGCCC GGGGCACGCA GGCGGCCGGG ACGACGCTGA CGGCCCTGCG CTCGACGGTG
CACGCCCTGC GCGGCTGGCC GACCCCGCTG GGCGTCACCC TGAACACCGC GGTGCCGCTC
TTCGACCCGC ACGGGCGAGT GCTCGACCGG ACCGTCGCGG CCCGCCTGGA CACCCTCGCC
GACCAGATCA TGGGGTTCAC CTACGCCTGG TCCCAGGTGC TCTGA
 
Protein sequence
MPDPGRGGVV GDTFGMFQPG ASNGEPRSGR SQTVGTDPVS GLPSRVSAHR SPDMPPDGPG 
PVRARRRRPL IVGIGGSSRA NSTTHQALAT VLAMMGQAGA ETMLLGAADL DLPMYAPERQ
ERPAAALRLL AAVERADGLV IATPGYHGGI SGQVKNALDY LEDLRGAPRP YLDGRAVALI
VGARGTQAAG TTLTALRSTV HALRGWPTPL GVTLNTAVPL FDPHGRVLDR TVAARLDTLA
DQIMGFTYAW SQVL