Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3453 |
Symbol | |
ID | 3905693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4113557 |
End bp | 4114048 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880776 |
Product | MerR family transcriptional regulator |
Protein accession | YP_482536 |
Protein GI | 86742136 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0445527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCTA CCGATATGAT GACTGTGGGT GAGCTCTCGC AGCGAAGTGG CTTCGCCGCG TCGGCGCTGC GCTTCTACGA ACAGCAGGGC CTGCTCACCG CCACCCGGAC CTCGGGTGGG CAGCGCCGGT ACGAGCGCCA TGTCCTGCGG CGGCTGGCGT TCATCCGCGC CGCCACCGCG GTCGGGCTCA GTCTCGACGA GGTGCGGGAG ACCCTGTCGA CGCTGCCCGA GTCGCGCACG CCGACCAAGG CGGACTGGTC CGCGATCTCG CGGCGGTGGC GCGGCCGGCT GGACGACGAG ATCGCGGCCC TGGTCGCTCT GCGTGACGGA CTCAACTCGT GCATCGGCTG CGGCTGCTTG TCGCTGCGAA GCTGCCGCAT CTCGAATCCG CACGACCGGA TCGCCGAGCT GGGGCCGGGC GCTCGCGCGC TGCCGGCTGC GCTGCGCCGG ACCCGCAACC CCCTCGATCG GTGTGGTCAG CCCGTCCGAT AG
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Protein sequence | MLPTDMMTVG ELSQRSGFAA SALRFYEQQG LLTATRTSGG QRRYERHVLR RLAFIRAATA VGLSLDEVRE TLSTLPESRT PTKADWSAIS RRWRGRLDDE IAALVALRDG LNSCIGCGCL SLRSCRISNP HDRIAELGPG ARALPAALRR TRNPLDRCGQ PVR
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