Gene Francci3_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3452 
Symbol 
ID3905692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4112105 
End bp4113322 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content73% 
IMG OID637880775 
Productgalactose-1-phosphate uridylyltransferase 
Protein accessionYP_482535 
Protein GI86742135 
COG category[C] Energy production and conversion 
COG ID[COG1085] Galactose-1-phosphate uridylyltransferase 
TIGRFAM ID[TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.116416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCT TCGTCGCAAT GGACGACATC ACGCATCGGC GGTTCAACCC GCTCACCGGC 
CGTTGGGTTC TGGTCTCGCC GGGGCGGACG CGGCGACCGT GGCACGGCGG TCAGGAACCA
CCGCCGGTGC CGGCCGCGGT CGCCCATGAT CCTCTATGCG ACCTCTGCCC GGGTAACCTC
CGGGCCGGCG GTGAACGTAA CCCCTCCTAC TCCGGTACCT ACGTGTTCAC CAACGACTTC
CCGGCGCTGC GTCCCGACCC GGTTCGGCCC GCAGCCCTGC TCGTCGCCCC GCCCGCCGAC
CCGCCTGTCG CCCCGTCCGC CGACCCGGCC CCGGTGTGGC CGGCGGGTCC CGGATCGGGC
CTGCTGCGCA GCGAACCGGC CCGGGGGACC TGCCGGGTCG TGTGCTTCGG CCCTCGTCAT
GATCGCGGGC TCGTCGACAT GACTCCGGCC GAGGTCCGGG CGGTCGTGGA CACCTGGGCG
GCGCAGGAGG AGGAACTCTC CCGCACCTGG CGCTGGGTGC AGGTCTTCGA GAACCGCGGC
ACCGCGATGG GCGCGTCGAA CCCGCACCCC CACGGTCAGA TCTGGGCCTG CGACGCGTTG
CCCGACGAGC CAGCCGCCGA GGACGCGCGG CAGCGGGAGC ACTTCGCCCG CTCTGGCAGC
TCCCTGCTGA TGGACTACGC CGAGATCGAG ACGGCGGCGG GGGAGCGGGT GATCCTGGCG
GAGGAGCACT GGCTCGTCGT CGTGCCGTTC TGGGCGCTGT GGCCGTTCGA GACCCTGCTC
CTGCCCCGGC ATCCGGTCGA CCGCCTCGCC GCGCTCTCCG ACGACCAGCG GGACGGGCTG
TCCCGCCTGC TCGGCCGCCT CCTCACCGGC TACGACGCCC TGTTCGACCA TCCTTTCCCG
TTCTCGATGG GCTGGCACGG GGCTCCCGGG CCGCATCCCG CGCCCGGACC CCGGCCGGGG
CCGGAGCTGG GGTCGGAGCC GGAGCCGGAG TCGGGGCTGG GGCCGGACCT TGATCCTGGT
TGGGGACCCG GCGATCCACC CGCGGCGTTC TGGCAGCTGC ACGCCCACTT CTATCCGCCG
TTGCTGCGCT CCCCGACCAT TCGCAAGCAT CAGGTCGGCT ACGAGATGCT CGCCGACGTG
CAGCGCGACC TCACCCCGGA GGCAGCCGCG GACCGGCTGC GCGCCGTCAT GGCTCCCGTC
GCCGCGAACC GGACCTGA
 
Protein sequence
MAGFVAMDDI THRRFNPLTG RWVLVSPGRT RRPWHGGQEP PPVPAAVAHD PLCDLCPGNL 
RAGGERNPSY SGTYVFTNDF PALRPDPVRP AALLVAPPAD PPVAPSADPA PVWPAGPGSG
LLRSEPARGT CRVVCFGPRH DRGLVDMTPA EVRAVVDTWA AQEEELSRTW RWVQVFENRG
TAMGASNPHP HGQIWACDAL PDEPAAEDAR QREHFARSGS SLLMDYAEIE TAAGERVILA
EEHWLVVVPF WALWPFETLL LPRHPVDRLA ALSDDQRDGL SRLLGRLLTG YDALFDHPFP
FSMGWHGAPG PHPAPGPRPG PELGSEPEPE SGLGPDLDPG WGPGDPPAAF WQLHAHFYPP
LLRSPTIRKH QVGYEMLADV QRDLTPEAAA DRLRAVMAPV AANRT