| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3449 |
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| Symbol | |
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| ID | 3905689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4106416 |
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| End bp | 4109586 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637880772 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_482532 |
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| Protein GI | 86742132 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0502975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCG GGGGCGATGG GCACGGCGCT CCCGACTGTT TCGTGTCGTA CGCGGACGAC
GGGCGGGCCT GGGCCGAATG GATCGCCGGG ACGTTGGAGG ATGCCGGCTA CCAGGTCCTG
CTTGAGTCCT GGGCGCCGGC GGGGACGCAT CGGGTGGGGT GGCTGGACCG GGCGGTGAGC
CAGGCCCGGC ACACGATCGC GGTGGTCTCC GACGGCTACC TGCGCTCCTC GCCCGCGGTC
GCCGAATGGG CGGCGGCGTG GTCGGCCGAC CCGACCGGAG GCGAACGCCG GCTGCTGGTG
ACCAGGGTGG CGGACCGGCC GCTGCCCGGT CTGCTAGGCC AACTCGTCCC GGTCGACCTG
TTCGACCGCA GCGAGATCGC CGTCCGGGCC AGCCTGCTCG CGGCCCTGCG CGGCGACCGG
CCACAACCGG AACAGCCGCC GGGCTTCCCG GGCCGGCGGG GGATCTTCCC GCCGGAGCTG
CCGGCGGTGT GGAACGTGCC GGATCAGCCG GCCCGGTTCG TCGGCCGGAC GGCCGCGCTC
GCCCGGCTCG ACGAGGCGCT GTCCCGCTCG CCGCTGGTCA CCGTGACGGG AATCGCGGGG
ATCGGGAAGA CCAGCCTGGT CACCGAGTAC GTCCGCCAGC ACCGGGCGGA TCTCGACGCC
GTGTGGTGGG TGCCGGCGGA ACGCCCCGAG CTGATCGGCG AGCGGGTGCG CGAGCTCGCC
CCGGCGGTGG GCCTGCCCGG CCACGCGGAA CCGGCCGCCG TGATCGCGAA CCTCGGCCGG
GCCGACGGCC GCTGGCTGAT CGTCCTCGAC GACGCCGCCG ACGCCGACAC GCTGCCGGAC
TGGCTGCGGC CCACCGAACC CGGCCGGCTG CTACTGACCT CCCGCAACCC CGGCTGGGAC
CATCTCGGCC CGGTCGTGCC GGTCGGACCG ATGGACCGGG CCGAGTCCGT CACCCTGCTC
GCCGGCCGGC TGCCCGCCGT CGAACGGACG GTCGCCGACC GGATCGCCGA GCGGCTCGGG
GACCACCCGC TCGCCCTCGA CCAGGCCGCC CACCGCATCA GCACCGGCCG CACCCCCGCC
GAGACCTACC TTCAGGTGTT AATCGACCGG CCGGAGGTCC TCCTGGCGCA GGGGGAGGTG
AGCGGGCGGC CCGGGGCCAC CGCCGCCACC CTCTGGGACG AGCCGATCCG CCGGCTCGAC
GCCGAGGCAC CGGCCGCCGG CCACCTGCTG CGGATCGTCG CGCACGGCGA CAACGAACCG
ATCCCGATCC GGCTGTTCAC CGCCGAGCCG GACGTGATCC CCGATTCCGG GCTGCGGGCG
GCGGCCGGCG ACCCGCTCGC CCTCGCCGAC ACCGTCGGCG TCCTGGAGCG GTACGGCCTG
GCCCACCGCG ACGCGGACAC CGTGACGATG CACCGGCTGG TGCGGGCCGC CGTGCACACC
CACACCGGCC CCGACCAGGC CGACGAGATC GTCGCGACCA TGGCCCGGAT GCTGCGCGCG
TCGCTGCCCG ACGCCGTCAC GGCCAACCCG GAAGCCTGGC CCGCCTGGCG GGAGCTGCTC
CCGCACACGC TCGCCGTGCT CGACGCCACC GCCACCGACT CCACCGACGC CGACTCCACC
GACGCCGACG GGCCGGAGGC CGACGGGCCG GAGGCCGACG GTCCGGAGGC CGCCTGGCTG
GCGGAACGCT CGGCGGCCTA CCTGCTCGGG CAGGGCCGAG CCGATCAGGC CCTCCCCCTC
GCGGCCCGCG CCCTGGCCGC CCGCGAGCGG CTCGACGGCC CGGTGCACGT CGACACCCTG
GCCTGCCGGG AGACCCTCGC GCGGGTCGCC CTCGGCGCCG GACGGATCGA CGCCGCCGGC
CGCCTGGCCG AACACACCGT CGCCGACCGC GAACGCATCC TCGGCCCCGA GCACCCCGAC
ACCCTGGTCA GCCGGGACAC CCTAGCCCAG CTATTCCAGA AGGTCGGCCA GACCGACCGC
GCGGTCGAGA TGTTCCAGCG CACCCTCGCC ACCCGGGAAC GCATCCTCGG CCCCGAGCAC
CCCGACACCC TGGAAGGCCG GCACAGCCTC GGCCGCGCCT ACGACGCCGC CGGCCGCGAC
GACGAGGCGG CCCGGCTGCT GCGGGACACC CTCGCCGACC AGCGGCGGAT CCTCGGCCCG
GAGCACCCCG CCACCCTCGA CACCCGCCAC AGCCTCGCCG TCGCCTACCG CCGGATCGGC
GCGGTGGGCG ACGCCGTGCC GCTGTTCGAG CAGACCCTCG CCGCTCGCGA ACGGGTCCTC
GGCCCCGAGC ATCCCGCCGC CCTCGGCACC CGCCACCAGC TCGCCGTCAC CCATCACCAG
GCCGGACGGC TCGACGACGC CACGCGCGAG TTCGGCCGCG CGCTGACCGG CCGCGAGCGC
ACCCTCGGCC CCGACCACCC CGACACCCTC GAAACGGTCG ACGGACTCGC CCGCGCCCAC
CTGTACGCCG GACGGCTCGA CGACGCCGCA CGCGAGTTCG GCCGCGCGCT GACCGGCCGG
GAACGCGCCC TCGGCCCCGA CCACCCCGAG ACCACCGAGA CCCGCGAGAG CCTCGCCACC
GCCCACCTCA GGCTGGGCCG GCCCGGCGAG GCCGTCCCCC ATCTCGAACG CGCCCTCGAC
CGCCACGAGC ACGTCCTCGG CCGCGCGCAC CCTTACACTG TCGAGGCCCG GAACGCCCTC
GCGACGACCT ACCGGCGCAC CGGGCAGCTT GAGGCGGCCG TGCCGCTGCT CGAACGGCTG
CTCGCCGACC GGAGCCGGGC GCACGGCGTC GGCGACGCGC GCACCCTGCG CACCGCCGAC
GGGCTCGCCG AGGTCTACCG GACCACCGGC CGGCTTCCGC AGGCCGTCGG CCTGAACGAA
CGTGTCCTCG CCGTCCGCGA GCGGCTCCTC GGCCCCGGCC ACCCCGACAC CCGCGCCACC
CGGGGCGCCC TCGCCGACAC CTACCGCCAG GCCGGCCGGC CCGCCGACGC CGTCCCCCTC
TACCGCGCCG CGCTCACCGA CGCGCTGCGC GAGCACGGCC CGTTCCATCC GGACAGCACC
CGGGCCCGCC GCACCCTCGC CGACACTGTC GGCGAGACCC GCCACGATCA GCCGCCGCCC
CTCGAACGGC CGATCCCGGT GGAGCCGAGA TTCCGCCACC GCGACCCCTG A
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| Protein sequence | MTGGGDGHGA PDCFVSYADD GRAWAEWIAG TLEDAGYQVL LESWAPAGTH RVGWLDRAVS
QARHTIAVVS DGYLRSSPAV AEWAAAWSAD PTGGERRLLV TRVADRPLPG LLGQLVPVDL
FDRSEIAVRA SLLAALRGDR PQPEQPPGFP GRRGIFPPEL PAVWNVPDQP ARFVGRTAAL
ARLDEALSRS PLVTVTGIAG IGKTSLVTEY VRQHRADLDA VWWVPAERPE LIGERVRELA
PAVGLPGHAE PAAVIANLGR ADGRWLIVLD DAADADTLPD WLRPTEPGRL LLTSRNPGWD
HLGPVVPVGP MDRAESVTLL AGRLPAVERT VADRIAERLG DHPLALDQAA HRISTGRTPA
ETYLQVLIDR PEVLLAQGEV SGRPGATAAT LWDEPIRRLD AEAPAAGHLL RIVAHGDNEP
IPIRLFTAEP DVIPDSGLRA AAGDPLALAD TVGVLERYGL AHRDADTVTM HRLVRAAVHT
HTGPDQADEI VATMARMLRA SLPDAVTANP EAWPAWRELL PHTLAVLDAT ATDSTDADST
DADGPEADGP EADGPEAAWL AERSAAYLLG QGRADQALPL AARALAARER LDGPVHVDTL
ACRETLARVA LGAGRIDAAG RLAEHTVADR ERILGPEHPD TLVSRDTLAQ LFQKVGQTDR
AVEMFQRTLA TRERILGPEH PDTLEGRHSL GRAYDAAGRD DEAARLLRDT LADQRRILGP
EHPATLDTRH SLAVAYRRIG AVGDAVPLFE QTLAARERVL GPEHPAALGT RHQLAVTHHQ
AGRLDDATRE FGRALTGRER TLGPDHPDTL ETVDGLARAH LYAGRLDDAA REFGRALTGR
ERALGPDHPE TTETRESLAT AHLRLGRPGE AVPHLERALD RHEHVLGRAH PYTVEARNAL
ATTYRRTGQL EAAVPLLERL LADRSRAHGV GDARTLRTAD GLAEVYRTTG RLPQAVGLNE
RVLAVRERLL GPGHPDTRAT RGALADTYRQ AGRPADAVPL YRAALTDALR EHGPFHPDST
RARRTLADTV GETRHDQPPP LERPIPVEPR FRHRDP
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