| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3448 |
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| Symbol | |
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| ID | 3905688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4102317 |
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| End bp | 4106384 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880771 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_482531 |
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| Protein GI | 86742131 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0350076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTCCTC GCGACGCCCA TCGGCTGGGC CGACGGCTCG CCGAGAGCCG GCGCACCCGC
GAGCCCGCCG CGCGCCAGCG GGCCCTACAG GCCATCGCCG CCGAGGTGGA CCGGGCATCG
CTACGGCTGG AGCGGCGCCG GGCCAGCGTT CCGACGCTCG ACTACCCCGA CATCCTTCCG
GTCACCCAGC GCAAGGACGA GATTCTCGCC GCGATCCGGG ATCATCAGGT GGTCGTCGTC
GCCGGGGAGA CCGGGTCCGG CAAGACCACC CAGCTACCGA AGATCTGCCT GGAGCTCGGC
CGCGGGGTCC GGGCGATGAT CGGGCACACC CAGCCGCGCC GAATCGCCGC GCGTACCGTC
GCCGACCGCA TCGCGGAGGA ACTGCGCACC CCGGCTCCCC AGATGGGCGG CGTCGTCGGC
TACCAGACCC GGTTCACCGA CCAGGTGCAC GAGAACACGC TGGTCAAGCT CATGACGGAC
GGCATCCTGC TGGCCGAGAT CTCCTCCGAT CGCCAGCTGC GCCGCTACGA CACGCTCATC
ATCGACGAGG CGCACGAGCG CAGCCTCAAC ATCGACTTTA TCCTCGGCTA CCTGCGGTCG
CTGCTCCCCC GCCGGCCGGA TCTCAAGATT GTCATCACCT CCGCGACGAT CGAGACGGCC
CGGTTCTCCG CCCACTTCGC GGGTGCCCCG GTCATCGAGG TGTCCGGGCG CACCTATCCG
GTCGAGGTCC GCTACCGCCC GCTCGTCCCG GCGGCCAGCG GCCCAGCCGG CGGACCAGCC
AGCGGACCAG CCAGCGGCCC GGCCGACGCG CGGAGGACCG GCAGGGAGAA CGGCGAGGCC
GAGCGCGACC AGACCCAGGC CATCAGCGAG GCGGTCGACG AGCTGTGCGC GGAGGGCCCG
GGCGACATCC TGGTGTTCCT CAGCGGCGAA CGGGAGATCC GCGACACCGC CGAGGCACTC
ACCCGCGAGC AGCGGCCGAA CACCGAGATC GTGCCGCTCT ACGCCCGCCT GTCCGCCGGC
GAGCAGCACC GGGTGTTCCA GCCGCACACC GGACGGCGGG TGGTCCTGGC CACCAACGTC
GCCGAGACCT CGCTGACCGT GCCGGGGATC CATTATGTGA TCGACCCGGG CACCGCCCGG
ATCTCCCGCT ACAGCCACCG CACCAAGGTG CAGCGGCTGC CCATCGAACC GATCTCGCAG
GCCTCCGCCA ACCAGCGCAA GGGGCGCTGC GGGCGGACCG CCGACGGCAT CTGCATCCGC
CTCTACAGCG AGGAGGACTT CGCCGGCCGG CCGGAGTTCA CCGATCCGGA GATCCTGCGG
ACGAACCTGG CCTCGGTCAT CCTGCGGATG GCCGACCTTG GCCTCGGCGA GATGGCCACG
TTCGGGTTCC TCGATCCACC CGACCCCCGC CAGATCAGCG ACGGCGAACT GCTCCTCGCC
GAGTTGGGGG CGTTCGACGC CACCGCGTCC GATCCCCGTC ACCGGATCAC TCCCCTCGGC
CGGCGGCTGG CGCAGATCCC GGTGGATCCC CGGCTGGCCC GCATGGTGCT CGCCGCCGAC
GAGCAGGGCT GCCTGCGCGA GGTGCTCGTC ATCGCCGCCG CGCTCGCGAT CCAGGATCCC
CGGGAGCGCC CGGTCGAGCA CCAGCAGGCG GCCGACGCCC GCCACGCCCG GTTCGCGGAC
CCGACCTCGG ACTTCCTGGC GTACCTGAAC CTGTGGAACT ACCTGCGCGA CGCCCGCGGC
GAGCTGTCGG CCAACCAGTT CCGGCGGATG TGCCGCACGG AGTTCCTCAA CTACCTGCGC
ATCCGGGAAT GGCAGGACGT GCACGGCCAG CTCGCCGCGG TGGTCCGCGG CCTGGGGCTC
ACCCCCCGGG ACGACAGCTC CGGCGCGGCC GATCCACGAA CCGTGCACCG GGCCCTGCTG
ACCGGGCTGC TGTCGCACAT CGGTCGTTAC GACCCGGAGC GCCGGGAGTA CGCCGGCGCC
CGCGGCGGCC GCTTCGCGCT CTGGCCGGGC TCCGTCCTGG CCCGGCGGTC GAACCGTGCC
GAGCGCACCG GGCCGACAGC CACGTCGGCG AACCCGGCAG CCGCGCTGGC GGACCCGGGG
GACCCGGCGG GCGAGGACGC GCCGAAGCGG CCGTCCGGAC CACCCGCCTG GGTGATGGCC
GCCGAGCTGG TGGAGACCTC CCGGCTGTGG GGCCGCACCG CCGCGCGGAT CGACCCGGAC
TGGATCGAGC CGCTCGCCGC CCACCTGGTG CATCGCACGT ACAGCGAACC GCGCTGGTCG
CGCCGGCAGG GCGCGGTGCT CGCCGACGAG AAGGTGACTC TGTACGGGGT GACGATCGTC
GCCTCCCGGC CGGTCCAGTA CAGCCGGATC GACCCGGTCC TGTGCCGGGA GCTGTTTCTC
CGGCACGCAC TGGTCGAGGG TGACTGGCAG ACCCGCCACA CTTTCTTCCA CGCCAACCGG
GAGCTGCTCG CCGACGTCGA GGAGCTGGAG CACCGGGCCC GGCGGCGCGA CATCGTCGTC
GACGACGAGA CGCTGTTCCA TTTCTACGAC GAGCGCGTCC CCGCGGACAT CGTGTCCGCC
CGGCACTTCG ACGCCTGGTG GCGCAAGGCG CGCCGGACGA CCCCGGACCT GCTCGACTTC
CCGCGCTCGA TGCTCGTCAC CGCGGACGCC ACGGGAATCA CCGAGGCCGA CTACCCCGAC
GTCTGGCAGG CGGGCGACCT CGCGCTGCCG CTGAGCTACC AGTTCGAACC GGGCTCGGCG
GCCGACGGGG TCACCGTGCA CATCCCGCTG GCCGTGCTGA ACCAGGTCGG CGCCGAGGGC
TTTGAATGGC AGGTGCCGGG GCTGCGCGAG GAGCTCGTCA CCGCCCTCAT CCGGGCGCTG
CCGAAGGCGG TGCGGCGCAG CTTCGTCCCG GCGCCGAACT ACGCCAAGGC GGTCCTGGCG
AACATCACGC CACGCCAGGC GCCCCTGCTC ACCGCGGTGG AACACGAGCT GCGCCGGATG
GGCGGGCCGG AGATCCCGCG CGATTCCTGG TCGCTGGCGG GTGTGCCGGA TCACCTGCGG
TTCACCTTCC GGGTGGAGGA CGCCGGCGGG CGGGTACTGG CCGAGGGCAA GGACCTCGAC
GCCATCAAGG AGCGGCTGCG CCCGAGGACC CGGGAGGCCG TCGCTGCCGC GGCGGACGGC
CTCGAGCGGG CCGGCCTGCG GGCGTGGGGG GACCTCGGCA CCCTGCCGAA GGTCGTCGAG
CTGCGCCGCG GCGGCAACGT GGCGGGCGGC CACGTGGTGA AGGCGTTCCC GGCGCTGGTC
GACGAGGGCG GTTCGGTCGC GGTGCGAGCC GCCGACACCG AGGCCGAACA GCGCCAGCTG
ATGTGGGCCG GCACCCGGCG CCTGGTGCTG CTGGGCGTCC CCTCCCCGGT GCGCGGCCTC
AACGCCCGGC TGTCGAACGC CGCGAAGCTG GCCCTGAGCC ACAACCCGCA CCGCGACGCC
GCCGACCTGC TGGACGACTG TGTGCGGGCC GCCGCCGACC GGTTGATCGC CGCGGCCGGC
GGGCCCGCCT GGGACGAAGC GGGCTTCACC GCGCTGCTCG CCGCGGTACG CGCGGGACTG
CCCGAGGCCG CCTTCGAGGT GGTCCGCGAG GTTCAGCAGG TGCTCGGCCT CGCCCACGCG
GTCGATCTGG CGCTGCGCGA GCTGCGTGCC CCGGCGGTGG CGGCGTCGGT GGCCGACGCG
CGTGACCAGC TCATCTCGTT GATCTACCGG GGATTCGTCA CCGACACCGG GGCCGACCGG
CTGGCGGACC TCGTCCGCTA CCTGACCGCG CTGGAACGGC GACTGGAGCG GCTGCCCCGC
GATCCCGGGC GGGACAGGCT CAACACCGCG ACCGTCGGGC GCGTCCAGGA CGCCTATCGG
GAGCTGCTCG CCACCGTCCC CGCCGGCCGG GAGCCGGCGC CCGAGATCCG GCGCCTCCGC
TGGATGATCG AGGAGCTGCG GGTGAGCCTG TTCGCGCAGA GCCTGCGCAC CCCGTACCCG
GTTTCCGAGG AACGCGTCTA CCGGGCGATC GACGCCATCC TCGGTTAA
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| Protein sequence | MSPRDAHRLG RRLAESRRTR EPAARQRALQ AIAAEVDRAS LRLERRRASV PTLDYPDILP
VTQRKDEILA AIRDHQVVVV AGETGSGKTT QLPKICLELG RGVRAMIGHT QPRRIAARTV
ADRIAEELRT PAPQMGGVVG YQTRFTDQVH ENTLVKLMTD GILLAEISSD RQLRRYDTLI
IDEAHERSLN IDFILGYLRS LLPRRPDLKI VITSATIETA RFSAHFAGAP VIEVSGRTYP
VEVRYRPLVP AASGPAGGPA SGPASGPADA RRTGRENGEA ERDQTQAISE AVDELCAEGP
GDILVFLSGE REIRDTAEAL TREQRPNTEI VPLYARLSAG EQHRVFQPHT GRRVVLATNV
AETSLTVPGI HYVIDPGTAR ISRYSHRTKV QRLPIEPISQ ASANQRKGRC GRTADGICIR
LYSEEDFAGR PEFTDPEILR TNLASVILRM ADLGLGEMAT FGFLDPPDPR QISDGELLLA
ELGAFDATAS DPRHRITPLG RRLAQIPVDP RLARMVLAAD EQGCLREVLV IAAALAIQDP
RERPVEHQQA ADARHARFAD PTSDFLAYLN LWNYLRDARG ELSANQFRRM CRTEFLNYLR
IREWQDVHGQ LAAVVRGLGL TPRDDSSGAA DPRTVHRALL TGLLSHIGRY DPERREYAGA
RGGRFALWPG SVLARRSNRA ERTGPTATSA NPAAALADPG DPAGEDAPKR PSGPPAWVMA
AELVETSRLW GRTAARIDPD WIEPLAAHLV HRTYSEPRWS RRQGAVLADE KVTLYGVTIV
ASRPVQYSRI DPVLCRELFL RHALVEGDWQ TRHTFFHANR ELLADVEELE HRARRRDIVV
DDETLFHFYD ERVPADIVSA RHFDAWWRKA RRTTPDLLDF PRSMLVTADA TGITEADYPD
VWQAGDLALP LSYQFEPGSA ADGVTVHIPL AVLNQVGAEG FEWQVPGLRE ELVTALIRAL
PKAVRRSFVP APNYAKAVLA NITPRQAPLL TAVEHELRRM GGPEIPRDSW SLAGVPDHLR
FTFRVEDAGG RVLAEGKDLD AIKERLRPRT REAVAAAADG LERAGLRAWG DLGTLPKVVE
LRRGGNVAGG HVVKAFPALV DEGGSVAVRA ADTEAEQRQL MWAGTRRLVL LGVPSPVRGL
NARLSNAAKL ALSHNPHRDA ADLLDDCVRA AADRLIAAAG GPAWDEAGFT ALLAAVRAGL
PEAAFEVVRE VQQVLGLAHA VDLALRELRA PAVAASVADA RDQLISLIYR GFVTDTGADR
LADLVRYLTA LERRLERLPR DPGRDRLNTA TVGRVQDAYR ELLATVPAGR EPAPEIRRLR
WMIEELRVSL FAQSLRTPYP VSEERVYRAI DAILG
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