Gene Francci3_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3428 
Symbol 
ID3905668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4077789 
End bp4078208 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID637880751 
Productlimonene-1,2-epoxide hydrolase 
Protein accessionYP_482511 
Protein GI86742111 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGAGG CGCTGGACAC GGTGAAGCGC GCGCTGGACG CCTTCGACCT CGGTGACGAG 
GCCTCGGTGC TGTCGCTACT TGACGAGGAT CTGGTCGTCG AGGCACCGGG CGGGGTGCGG
ATCAAGGGGC GCGCGGCGGG CGCCGAGTAC AGCGCCGCCT TCCTGGCGGC CTTCGGTGAG
ATCGACGTCG ATACCCACGT GCTGGCCGAG CAGGGCGAGA TCGTGGTCGA GGAGTACACG
CTGACCGCGA CGCACGTCGG CGTCTACCGC GACCCGGACG GTACGGAGCT CGCGCCCACC
GGGCGTCGGA TCAACCTGCG TGTCGTCGAG GTCTACCGGG TCGAGCGCGG CCTGATCACC
GAGAACCGGC TGTACTTCGA CCAGACGCGG CTCGCTCGCC AGCTCGGTCG ACCCGCCTGA
 
Protein sequence
MGEALDTVKR ALDAFDLGDE ASVLSLLDED LVVEAPGGVR IKGRAAGAEY SAAFLAAFGE 
IDVDTHVLAE QGEIVVEEYT LTATHVGVYR DPDGTELAPT GRRINLRVVE VYRVERGLIT
ENRLYFDQTR LARQLGRPA