Gene Francci3_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3421 
Symbol 
ID3905661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4068551 
End bp4069081 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID637880744 
Producthypothetical protein 
Protein accessionYP_482504 
Protein GI86742104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4454] Uncharacterized copper-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC ACCTGCGAAC CTCGACCGCG GGCCCCGCCC GCCCCGGCCT TCTCGAGGGT 
CGACGGGCCG CGCATCGGCG CGGTGGGCGC CGGGCTGCCG CGGTCATGGC GACGGGCACG
GTGATCCTCG CCTTCACCGC CGCGTGCGGC GGCACAACCA CCCCGACGCC ACGGCCCACG
CCGACCACGC CCGCTTCGGT GTCGGCCAAG CCGTCCCCGA CCGGTCCGTT GACGAGCGCG
GGAACCGCGG GCGCGACGAA GGTGACGGTC ACCGAGACCG AGTTCGTGAT CAAACTTTCC
CGGAACACGT TCACCCCGGG CATCTACACC TTCGTCACCC AGAATGCCGG GCACGTGACG
CACGCGCTGA GGATCGAGGG GCCCGGCCTG CACGAGGCCA CGACGAAAGA CCTCGCACCC
GGTGAGTCCG AGGACCTCAC CGTGACTCTG CAGCCGGGTA CCTACGAGCT GGACTGCCCG
GTCGACAACC ACGAGTCGCT GGGGATGAAA CTCGACATCA CGGTGTCCTG A
 
Protein sequence
MTDHLRTSTA GPARPGLLEG RRAAHRRGGR RAAAVMATGT VILAFTAACG GTTTPTPRPT 
PTTPASVSAK PSPTGPLTSA GTAGATKVTV TETEFVIKLS RNTFTPGIYT FVTQNAGHVT
HALRIEGPGL HEATTKDLAP GESEDLTVTL QPGTYELDCP VDNHESLGMK LDITVS