Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3390 |
Symbol | |
ID | 3905972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4018557 |
End bp | 4019699 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880712 |
Product | phage integrase |
Protein accession | YP_482473 |
Protein GI | 86742073 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.457937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTC CCAGTCTAGA TCTCGGTGTC GGCGGAAAGA TCTTCTACAG CGCCACGGCG AAGGGCTCCC GGGCACGCTG CTTCTACCGC GACCATGACG GGGTACGCCG CGAAGTCGAA CGCGGCGGCA CCTCCAAGGC GGCGGCCACA CGGGCACTGA AACTCGCGCT GCGTGACCGG CTGCGGGTCG CGGTCGGCGA CGGCGACATC ACACCGGAGA CGACTATGAA GGTCCTCGGT GAGGCGTGGT TTGCCGAACA GCAGAAGAAA GACCGCTCTC CCAACACCCT CGCGGCCTAC CGCACCACCC TCGACCGGCA CGTCTACCCC GCACTCGGCG GAGTGAAGGC CCGACAGGTC ACGGTCGGAA CCGCGGACCG GTTTTTCAGC GCGGTCACGA CCAAAAGCGG CCCCGGTGCG GCGCGGATCG CGCGAACAGT GCTGTCCGGC ATGTGCGCGA TGGCCGCCCG GCTCGACGCA ATGGACCGCA ACGTGGTCCG CGACGCCGGG CAGATCACCC GACCGGAACC GAAGCCGGTA TCCAAGGCGC TCGGCGCAGC CCAACTGCGG CAGTTGCGGG CGCTGCTCAC CTACGACGAA CGGGCGCGGC GCCGCGACAT CCCCGATCTT GTGGACATGC TCATCGCCAC CGGCGCGCGC ATCGGGGAGG TATGCGGGAT CGTCTGGGAC GCGGTCGACC TGGACGCGGG CACCGTGGAA ATCCGGTCCA CCGTGGTGCG GATTACCGGC CAGGGTCTGA TCAACAAGCC TCGTCCGAAG TCGAAGGCGG GCCACCGGCT GTTGCTACTC CCGGCCTGGG CCGTGGCCAT GCTGCGCACC CGCCACCACG GACAGAACAG TGACGAGGTG GTGTTCCCCG CGCAGATGGG CGGCCTACGC GACCCGAGTA ACACTCAGGC CGACATCCGC GACGCCGTGA ACGATGCCGG CTTCCCCGGC CTGACGTCCC ACCTGTTCGG CCGCAGGTCC GTTGCCACCC TCCTCGATGG GGATGGGCAT ACCCCCCGCC AGATCGCCGA TGTCCTCGGC CACGCCAACC CGTCCATCAC CCTGTCCACC TACATGGGCC GGAAGGTCTC GAACCCCGGC GCGGCGGAAA CCCTCGCGGT CCTGGCCATA TGA
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Protein sequence | MARPSLDLGV GGKIFYSATA KGSRARCFYR DHDGVRREVE RGGTSKAAAT RALKLALRDR LRVAVGDGDI TPETTMKVLG EAWFAEQQKK DRSPNTLAAY RTTLDRHVYP ALGGVKARQV TVGTADRFFS AVTTKSGPGA ARIARTVLSG MCAMAARLDA MDRNVVRDAG QITRPEPKPV SKALGAAQLR QLRALLTYDE RARRRDIPDL VDMLIATGAR IGEVCGIVWD AVDLDAGTVE IRSTVVRITG QGLINKPRPK SKAGHRLLLL PAWAVAMLRT RHHGQNSDEV VFPAQMGGLR DPSNTQADIR DAVNDAGFPG LTSHLFGRRS VATLLDGDGH TPRQIADVLG HANPSITLST YMGRKVSNPG AAETLAVLAI
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