Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3385 |
Symbol | |
ID | 3905967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4014056 |
End bp | 4014982 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880707 |
Product | transposase, IS4 |
Protein accession | YP_482468 |
Protein GI | 86742068 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.300712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTTCC GGGGTGCGCG ATGGGGGTGC ACTCGTCGGA TCATGGCCGG GTGGGGGTGG CTGGGGGCTG ACGGTGGACG GATGGCGCAT GCTCACCGTC ATCGGTATCC GTCGGATCTG TCGGACTCGC AGTGGGCTCT GGTCGGGCCG TTGCTCCCGC CGCCGGCGGC GGTGTGCCGG CCGGAGAAGC ATGATCGGCG TGATCTGGTG GACGCGATCC TGTATGTGGT GCGCTCGGGG TGTGCGTGGC GGGCGTTGCC GTCGGACTAT CCGCCGTGGC AGACCGTGTA CTACTACTTC GCCCTCTGGC ACGATCTGGG TGTCACCGAA CGTGTTCACG ACGTGCTGCG GGAGCAGGCC CGCCGGGCGG AAGGACGCGA TGTCGAACCG TCGGCGGGGA TCATCGATTC CCAGTCGGTG AAGGGCGCCG ACACCGTGCC CGCCTCCTCC CGCGGCTACG ACGCCGGCAA GAAGGTCAAC GGTCGTAAGC GGTTCATCGC TGTGGACACG ATGGGACTGC TGCTGGCCGT GCTCGTGGTC CCGGCCAGCA CCCATGACAC CGCCAGTGGC CGGCAGCTCC TCCTCGACAG TTTCTTCGCC GGCCGGCGGC TACGGCTCGT ATTCGCCGAC GCCGGGTTCG CGGGTGTCTT CATGGACTGG GCCGCCCGGA TCCTGACCCT CACCCTGCAG GTGGTGCGCA AACCCGCCGG GCAGAAGGGC TTCTCCGTCC TGCCACGTCG CTGGGTCGTC GAACGAACGT GGTCGTGGAT CACCGGCTAC CGCCGGCACG CCCGCGACTA CGAACGCCGC CCCGACCACG CCGAATCCCT CATCCGCTGG GCCATGATCG CCACCATGGT CCGCCGCATC GACCGGCGCA CCCCCGCCCA GCGGCCCGGA CCCCGACCGC TACAGAGAAT CATCTAA
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Protein sequence | MIFRGARWGC TRRIMAGWGW LGADGGRMAH AHRHRYPSDL SDSQWALVGP LLPPPAAVCR PEKHDRRDLV DAILYVVRSG CAWRALPSDY PPWQTVYYYF ALWHDLGVTE RVHDVLREQA RRAEGRDVEP SAGIIDSQSV KGADTVPASS RGYDAGKKVN GRKRFIAVDT MGLLLAVLVV PASTHDTASG RQLLLDSFFA GRRLRLVFAD AGFAGVFMDW AARILTLTLQ VVRKPAGQKG FSVLPRRWVV ERTWSWITGY RRHARDYERR PDHAESLIRW AMIATMVRRI DRRTPAQRPG PRPLQRII
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