Gene Francci3_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3383 
Symbol 
ID3905965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4012408 
End bp4012785 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content68% 
IMG OID637880706 
ProductGTP cyclohydrolase I 
Protein accessionYP_482467 
Protein GI86742067 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.295645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGA CGAAGCTGGG CAACCCGGAG GCGAAGGCCG ACCGGTCCCT GGAGACGTTC 
CCGATCGACG ACACCTCGCA GGAGATCAGG ATCGACTGCC GGGAGTTCAC CTGCCGGTGC
CCGATCACCG GCCAGCCGGA CTGGGCGACG ATCCGCATCG ACTACCGGCC GGGCGGGCGT
GGTCTGGAGA CCAAGAGCCT CAAGCTCTAC CTGGAGACCT TCCGGGAGGA AGGGATCTTC
CACGAACACC TGGCCACCCT GATACGTGAC GATCTGGTGG CCGCGCTCGC TCCGGTGCAG
CTCACCGTCA CCGTGAACTT CAACGCCCGG GGCGGCATCG CGCTGGCGGC CTCCAGCACC
TACCGTCGCG AGGCCTGA
 
Protein sequence
MALTKLGNPE AKADRSLETF PIDDTSQEIR IDCREFTCRC PITGQPDWAT IRIDYRPGGR 
GLETKSLKLY LETFREEGIF HEHLATLIRD DLVAALAPVQ LTVTVNFNAR GGIALAASST
YRREA