Gene Francci3_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3381 
Symbol 
ID3905963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4011099 
End bp4011473 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content71% 
IMG OID637880704 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_482465 
Protein GI86742065 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.175681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCT TCCGCGAGTT CACCTTCGAG GCCGCGCACC GCCTGCCGGA GGTGCCGGAG 
GGTCACAAGT GCGCCCGGCT GCACGGGCAT TCCTTCCGGA TCGCGATCCA GGTGGTCGGC
CCGGTCGACC CCCGGGCTGG ATGGGTGATG GACTTCGCCG ACCTCCGGGC GGCGTTCGCT
CCGCTGCACG ACCAGCTGGA CCACCGCTAC CTCAACGAGG TGCCGGGCCT GGACAACCCG
ACCAGCGAGA ACCTCGCCCG GTGGATCTGG GACCGGCTGG CCGGCGAGCT CCCGCTGAGC
GCGGTCACCG TCCGCGAGAC CTGCACGTCG GGGTGCATCT ACCGAGGTGA CGAGCCGGAC
CGGACACCGG CGTGA
 
Protein sequence
MEIFREFTFE AAHRLPEVPE GHKCARLHGH SFRIAIQVVG PVDPRAGWVM DFADLRAAFA 
PLHDQLDHRY LNEVPGLDNP TSENLARWIW DRLAGELPLS AVTVRETCTS GCIYRGDEPD
RTPA