| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3377 |
|---|
| Symbol | |
|---|
| ID | 3905959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4007590 |
|---|
| End bp | 4008573 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637880700 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482461 |
|---|
| Protein GI | 86742061 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.6785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.108829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG CAGGAACGCG GCGCCGCCGC GTCGGCGGCG GAGTCGGGCC GGAAAGCGGA
GTCGGGCCGG AGAAAAGCGG AGTCGGGCCG GAGAGGAGTG CCACCGTGCC GGGCACGCTC
TATCTGGTCC CGGTGCCCAT CGGGGACCCC GGCGACATCA CCGCCCGAGC CGTCGACGTG
CTGCGGCAGG TCCCGGTGGT CGCGGCGGAG GACACCCGCA ACGCGCGGCG CCTGTTGCAG
CCGCTCGGGA CGTCGCCCCG GTTGCTCAGC TACCACGACC ACAACGAGCA GGAGCGGGGT
CCCCAACTGC TGTCGCTGCT GCAGGAGGGC GCGGACGTCG CCGTGATGTC GGACGCGGGC
ACCCCGCTGG TCAACGACCC CGGCTACCGC CTGGTCGCCG CGGCCATCGA GGCAGGGATC
CCGGTCCGCC CGCTGCCGGG GGCCAGCGCG CCGGTCACCG CGCTCGTCGG ATCCGGCCTG
CCGGTACACC GGTTCCACTT CCTCGGGTTC CTGCCCCGCC GACCGGCCGC CCGCCGGGCG
GCCCTGGAGC AGGTGCGCGG TCTCGACGCC TCCCTGGTGC TGTTCGAGGC GCCACACCGG
ATGACCGAGT GCCTGGCCGA CCTGACCGCC GTGCTGGGTG AGCGGCGGGC GGCGCTGGCA
CGCAACCTGA CCAAGCCGGA CGAGCAGTTC ATCCGGGGGA CGCTCGACGA GGTCCGTGCC
GTGCTGGCCG GGGAGCAGCC GGTCCGCGGG CAGTTCACGG TGGTCGTGGA GGGGGCGGGG
ACGCGGGCCG CCGCCGGGGA GACGGAGCTG GCCGACCGCG TCGCCGAGGC GATGCTGCGG
CACGGAGCGG GTGCCCGGCT GGCCCGCGAG GTGGTCCGTG AGGTCACCGG CCTGCCGCGC
AACCAGGTGT ACGCACTGGT CGGGGAGGCC GAGGGCCGGG TCCGGTCCGG TACCTGCCCG
CCCGCGGGTG GACCGGCCGA CTAG
|
|---|
| Protein sequence | MADAGTRRRR VGGGVGPESG VGPEKSGVGP ERSATVPGTL YLVPVPIGDP GDITARAVDV
LRQVPVVAAE DTRNARRLLQ PLGTSPRLLS YHDHNEQERG PQLLSLLQEG ADVAVMSDAG
TPLVNDPGYR LVAAAIEAGI PVRPLPGASA PVTALVGSGL PVHRFHFLGF LPRRPAARRA
ALEQVRGLDA SLVLFEAPHR MTECLADLTA VLGERRAALA RNLTKPDEQF IRGTLDEVRA
VLAGEQPVRG QFTVVVEGAG TRAAAGETEL ADRVAEAMLR HGAGARLARE VVREVTGLPR
NQVYALVGEA EGRVRSGTCP PAGGPAD
|
|---|
| |