Gene Francci3_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3368 
Symbol 
ID3905950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3996751 
End bp3997557 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content74% 
IMG OID637880691 
Productaminoglycoside phosphotransferase 
Protein accessionYP_482452 
Protein GI86742052 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3231] Aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0249921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAGG CTCCGTCCCG ACCCGTCGCG GCACCGGGAC CCGGCCCGGA CCGGGCCTGG 
GCACACGTCG TGACCCGCTC CTACGGCACC CGGGTGTACC GGCTCGACGG GCACTACCTG
AAGTCGGCGC CGCGACGCGG GCGCGAGGAC CATCGCTTTC AGGCCGAGGC CGAGGCCGAG
CGGCTCTCGT GGCTGGCCCG GCAGGGGATT CCGGTTCCCG AGGTGGTCGA CGTCGGCGCC
GACGAGACGC ACATGTGGCT GGTCACCCGG GAGGTGCCCG GGGTCCCCGC GGCGGGACCC
TGGCCGGCGG ACCGGCTCGA CCGGGTGATC GACGCGGTGG CCGAACTCGT CCTCGCCTTG
CACGGCCTGC CCGCCGCCCG GTGTCCCTTC GACCGCACCC TGCGGATCAC CCTCCCGGCC
GCCCGGCACG CCGTGCGGAC GGGCACCGTC GACCTGGCCG ACCTGGAACC ACGCCACCGC
GGCTGGAGTG CGCAGGACCT GCAGCGGGAA CTCGACGCCA CCCCGGCACC GGAGCAGGAG
CAGCTCGTGG TCTGTCACGG CGATCTCTGC CTGGACAACG TGCTGCTCGA CCCGGACACC
CTGGCCCCGA CCGCGCTGCT CGACGTCGGC CGCTGCGGTG TCGCCGACGT GTGGCTGGAC
CTGGCCGTGG CGGTGCGCAA CATCGGCGAG GAATGCACCC GCTGGGGCTA CGGTCCGGGC
CACGCGGCCC GGTTGCTGGC CCGCTGCGGC CGACAGCCCG ATCCCGTGCG CGAGCACTAC
TACCGGCTCC TGGACGAGTT CATCTGA
 
Protein sequence
MVEAPSRPVA APGPGPDRAW AHVVTRSYGT RVYRLDGHYL KSAPRRGRED HRFQAEAEAE 
RLSWLARQGI PVPEVVDVGA DETHMWLVTR EVPGVPAAGP WPADRLDRVI DAVAELVLAL
HGLPAARCPF DRTLRITLPA ARHAVRTGTV DLADLEPRHR GWSAQDLQRE LDATPAPEQE
QLVVCHGDLC LDNVLLDPDT LAPTALLDVG RCGVADVWLD LAVAVRNIGE ECTRWGYGPG
HAARLLARCG RQPDPVREHY YRLLDEFI