Gene Francci3_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3366 
Symbol 
ID3905948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3994884 
End bp3996008 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content69% 
IMG OID637880689 
Productradical SAM family protein 
Protein accessionYP_482450 
Protein GI86742050 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0273275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAC TGACCCCGGT GGTCAGGACC ATGCCCCGGT ACGTGACGGT GTTCGTGAAC 
TGGTCGTGCA ACCTGACCTG TCGTGAGTGC TGGATGTACG GGGACTCGGC CGCCGAGAGC
GGCTGGCTGG CGGACGTCCG CCGCGACCAG ATGAGCCTCG AGATGTGGAC CGCGCTGGTC
GACGAGCTCG CCGCGGACAC CGGCACCCCG GAGACGACCT ACCTGACCAT GATGGGCGGC
GAGCCGCTCA TGCACGATCA CGCGGTCGAG CTGATGCGGA TCGCCAAGGA ACGGCTGCCG
TCCTGCAACC TGGACATGAG CACGAACGGC ACGCTGCTCG ACCGGCATGC GGCCGGCATC
GTGGCCAGCG GCATCGACGA CGTCTACCTG TCCGTCGACG GCCCCTCTCC CGAGGTCAAC
GACCCCATCC GCGGGCGCAA CGCCTTCGGG CGGGCCATGA GGGGCCTGGC CGCCCTGCAG
GAGGAGACGC GGCGCGCCGG CCGGGGGCCG AAGGTCGCGA TCAACTTCGT GGTTACCGGC
ATGAACTACA CCCACCTGCC CGAGATGGTC CGGCTCACCG AACGGCTGGG CCTGTCCGAG
ATCACGGTGG GCCTGTCGAG CTTCTTCACC CGCACGGAGG GCGAGGGTTC CCGGGCCGCC
TTCGAGGCCG TGACCGGCCG GCCCTTCCTG TCCTGGGCCG GGTACTGCAA CGAACACCAG
CACGCCGACC TCGATCCGCA GCGGCTGCGC GACCTGCTCG ACGAGGCGAT GAACACCTCC
GACTCGGTGT CGGTCCTGGT CCCCCCCGTC CGCTACAGCA ACGAGGACAA GAGCAGGTTC
TTCACCCCCC GGTGGCACCA GACCGTCCGG GAGCGGACCT GTGTGAAGCT CTGGGCCCAG
ACCACGGTGC TTCCCAACGG CCAGGTCGTG AGCTGCACCA CGTTCGCCGA CACGGTCATG
GGGTCGCTGC GGGACGGATC CCTGCGGGAG GTGTTCCACG GCGAGACCTA CACCCGGATG
CGGGAGACCC TCCGGCAGGG GCTGCAGCCG ATCTGCTACC GCTGCTGCGA GTTGAACATG
GACATCGACG TGGACCCGAC CCTGTACGAC GCGGTGGCCC GGTGA
 
Protein sequence
MIPLTPVVRT MPRYVTVFVN WSCNLTCREC WMYGDSAAES GWLADVRRDQ MSLEMWTALV 
DELAADTGTP ETTYLTMMGG EPLMHDHAVE LMRIAKERLP SCNLDMSTNG TLLDRHAAGI
VASGIDDVYL SVDGPSPEVN DPIRGRNAFG RAMRGLAALQ EETRRAGRGP KVAINFVVTG
MNYTHLPEMV RLTERLGLSE ITVGLSSFFT RTEGEGSRAA FEAVTGRPFL SWAGYCNEHQ
HADLDPQRLR DLLDEAMNTS DSVSVLVPPV RYSNEDKSRF FTPRWHQTVR ERTCVKLWAQ
TTVLPNGQVV SCTTFADTVM GSLRDGSLRE VFHGETYTRM RETLRQGLQP ICYRCCELNM
DIDVDPTLYD AVAR