Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3366 |
Symbol | |
ID | 3905948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3994884 |
End bp | 3996008 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880689 |
Product | radical SAM family protein |
Protein accession | YP_482450 |
Protein GI | 86742050 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0273275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCAC TGACCCCGGT GGTCAGGACC ATGCCCCGGT ACGTGACGGT GTTCGTGAAC TGGTCGTGCA ACCTGACCTG TCGTGAGTGC TGGATGTACG GGGACTCGGC CGCCGAGAGC GGCTGGCTGG CGGACGTCCG CCGCGACCAG ATGAGCCTCG AGATGTGGAC CGCGCTGGTC GACGAGCTCG CCGCGGACAC CGGCACCCCG GAGACGACCT ACCTGACCAT GATGGGCGGC GAGCCGCTCA TGCACGATCA CGCGGTCGAG CTGATGCGGA TCGCCAAGGA ACGGCTGCCG TCCTGCAACC TGGACATGAG CACGAACGGC ACGCTGCTCG ACCGGCATGC GGCCGGCATC GTGGCCAGCG GCATCGACGA CGTCTACCTG TCCGTCGACG GCCCCTCTCC CGAGGTCAAC GACCCCATCC GCGGGCGCAA CGCCTTCGGG CGGGCCATGA GGGGCCTGGC CGCCCTGCAG GAGGAGACGC GGCGCGCCGG CCGGGGGCCG AAGGTCGCGA TCAACTTCGT GGTTACCGGC ATGAACTACA CCCACCTGCC CGAGATGGTC CGGCTCACCG AACGGCTGGG CCTGTCCGAG ATCACGGTGG GCCTGTCGAG CTTCTTCACC CGCACGGAGG GCGAGGGTTC CCGGGCCGCC TTCGAGGCCG TGACCGGCCG GCCCTTCCTG TCCTGGGCCG GGTACTGCAA CGAACACCAG CACGCCGACC TCGATCCGCA GCGGCTGCGC GACCTGCTCG ACGAGGCGAT GAACACCTCC GACTCGGTGT CGGTCCTGGT CCCCCCCGTC CGCTACAGCA ACGAGGACAA GAGCAGGTTC TTCACCCCCC GGTGGCACCA GACCGTCCGG GAGCGGACCT GTGTGAAGCT CTGGGCCCAG ACCACGGTGC TTCCCAACGG CCAGGTCGTG AGCTGCACCA CGTTCGCCGA CACGGTCATG GGGTCGCTGC GGGACGGATC CCTGCGGGAG GTGTTCCACG GCGAGACCTA CACCCGGATG CGGGAGACCC TCCGGCAGGG GCTGCAGCCG ATCTGCTACC GCTGCTGCGA GTTGAACATG GACATCGACG TGGACCCGAC CCTGTACGAC GCGGTGGCCC GGTGA
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Protein sequence | MIPLTPVVRT MPRYVTVFVN WSCNLTCREC WMYGDSAAES GWLADVRRDQ MSLEMWTALV DELAADTGTP ETTYLTMMGG EPLMHDHAVE LMRIAKERLP SCNLDMSTNG TLLDRHAAGI VASGIDDVYL SVDGPSPEVN DPIRGRNAFG RAMRGLAALQ EETRRAGRGP KVAINFVVTG MNYTHLPEMV RLTERLGLSE ITVGLSSFFT RTEGEGSRAA FEAVTGRPFL SWAGYCNEHQ HADLDPQRLR DLLDEAMNTS DSVSVLVPPV RYSNEDKSRF FTPRWHQTVR ERTCVKLWAQ TTVLPNGQVV SCTTFADTVM GSLRDGSLRE VFHGETYTRM RETLRQGLQP ICYRCCELNM DIDVDPTLYD AVAR
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