| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3364 |
|---|
| Symbol | |
|---|
| ID | 3905946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3993078 |
|---|
| End bp | 3994181 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637880687 |
|---|
| Product | alcohol dehydrogenase GroES-like protein |
|---|
| Protein accession | YP_482448 |
|---|
| Protein GI | 86742048 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0600954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGT CGCGCGTTCT TCGTCCACCG GCTGGGCGAC AGCCCGAATC CGGACGCATG
ATCATGACCG ATGACGACAT GCTGGCCCTG GTGGTCCGGG GGCACCGTGA CCACGGCCTG
GAGCGGCGTC CCCGGCCCGA GCCCGGTCCG GGCGAGGCCC TGGTCGCGAC CGACTTCGCC
GCCATGTGCG GTACCGACCT GCGGTTGCTG GACGGGACCC TGCACGACGC CGAGTACCCG
GTGATTCCCG GGCACGAGTG GTCCGGCACG GTGCTGGCGG CCCCCGACCG CCCCGAGCTG
GTGGGCCGGG CGGTGGTGGG CGACAACTTC CGGCTCTGCG GCCGGTGCCC CGCCTGCCTC
GCGGGACGGC CGAACCTGTG CACCGACATC GACGAGGTGG GCTTCACCCG CCCGGGTGCC
TTCGCCCAGC TGTTCACCAT CCCCGCCGCC AACCTGGTCG CGCTGCCGCC ACAGGTCCCG
GGCCCCCAGG CCTGCCTGCT GGAGCCGCTC GGCGTGGCCC TGCACGCCGT GGAACGGGCC
GGGGCGGTGT CCGGCCGGTC GGTCGGCGTG ATCGGCGCCG GAACGATCGG CCTGCTCGTC
GCCCAGCTGG CCCGCGGCGC CGGGGCGTCC CGGGTACGGG TGGCCGATCC CCTGCAGTCC
CGCCGGCGGA TCGCCGCCGA CCTCGGCGTC GACGCCGACC CGGGTATCGA GGGCTGGCAC
CCGGACCTGC CGGAGGTTGT CTTCGACGCC ACCGGAGCGG CCGGCGTGTT CCCCCGTGGC
CTGACGGCGA CCGCGGTCGG CGGCGTCTAC GTGCTCGTGG GCTACTCGGG AGCCGAGGCG
GTCACCGTCG AACCGAGCAC GGTGATGCTG CGCGAACTGA CCGTGCAGGG TGTGCTGTCC
GGTCAGGGGC AGCTGCGCAC CGCCCTGGCC AAGGTCGTTG CCGGCGAGGT CCGCCTGGGT
CCCCTGACCG GCGACCCGGT CCCGCTGACC TCGTACCGCA GTGTGCTCGA GCGCGACGGA
CCGGCACCGT TGCGCCTCTT CTTCCACGTC GGCGGCGACC GGACGGCCGG CGCCACCAGC
CAGGAGCAGG GGGTAACGGC ATGA
|
|---|
| Protein sequence | MARSRVLRPP AGRQPESGRM IMTDDDMLAL VVRGHRDHGL ERRPRPEPGP GEALVATDFA
AMCGTDLRLL DGTLHDAEYP VIPGHEWSGT VLAAPDRPEL VGRAVVGDNF RLCGRCPACL
AGRPNLCTDI DEVGFTRPGA FAQLFTIPAA NLVALPPQVP GPQACLLEPL GVALHAVERA
GAVSGRSVGV IGAGTIGLLV AQLARGAGAS RVRVADPLQS RRRIAADLGV DADPGIEGWH
PDLPEVVFDA TGAAGVFPRG LTATAVGGVY VLVGYSGAEA VTVEPSTVML RELTVQGVLS
GQGQLRTALA KVVAGEVRLG PLTGDPVPLT SYRSVLERDG PAPLRLFFHV GGDRTAGATS
QEQGVTA
|
|---|
| |