| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3359 |
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| Symbol | |
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| ID | 3905941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3984685 |
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| End bp | 3988023 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880682 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_482443 |
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| Protein GI | 86742043 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0181255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATCT TCCAGCCGAA GGGCGACTCG TTCGGGAGCC TGAACGAGAC CGTCCAGTCG
CGGCGCCTGA TCGTGAGCCG CTACCGCAGC CTGCGTGAAC GGCAGTGGGC CCTGCTGGTG
CTCTGCACCG GCGCCCTCGC CATCGTGATC GACACCTCCA TCGTGAACGT GGCCCTGCCC
TCCATCGGCC AGGACCTGGG GTTCTCCGCC GCCGGGCTCT CGTGGGTGGT GAACGCCTAT
CTGATCCCGT TCGGCGGACT GCTCCTGTTC GCCGGACGGC TGGGCGACCT GGTCGGCGCC
AAGCGGATGT TCCTCGCCGG AATCGCGCTG TTCACGCCGG CCTCCCTCGT CTGCGGCCTG
GCCCAGAACC CGGAGACGCT GGTCGCCGCC CGTTTCGTTC AGGGGGTGGG GGGTGCGCTG
GCGGCGGCTG TCGTGCTCGG TCTGGTCGTC TCCACCTTCC CCAACGCGAT CGAGCAGGCC
AAGGCGATCG GCCTGTACGC GTTCGTCTCC TCCGCCGGTG CCGCCCTGGG GCTGCTGCTC
GGGGCCTGGA TCACCGAGGC GCTGAGCTGG CACTGGACCT TCTTCATCAA CGTTCCGTTG
GGCCTGCTGG TCCTGCCGCT CGGCGCGCGG CTGGTGGACG ACGAACGAGT GGTGCTCGAC
GACCGCAGCA TCGACGTCCC GGGCGTCCTG CTGATCACGA GCGGACTGAT GCTCACGGTC
TACACGATCG TGCGCTTCGC CGACGGCGCG ACACCGCTGA CCTGGGCGCT GGTGGGGATC
AGCGCAGCCC TGCTGGCGGC CTTCGTCGTG CGGCAGCGGA CGGCCCGCAA TCCGCTCGTC
CCGTTGTCGA TCTTCCGGGC GCGGAACGTC GCCTGGGCCA ACATGGTGCA GGCGCTGATG
ATCGCCGGCA TGGGCGGCAT GTTCTTCCTC GGGACCCTAT ACCTGCGCCA GGTGCTGGGG
CTCAGCGCCA TGGAGGTCGG GCTGGCCTTC CTGCCCACCG CCCTCATGGT GGCCGTGATC
TCCCTCAAGG CGACGCCGCG ACTGATGGAG AAGATCGACC CCAAGACCGT GCTGGTGCCC
GGCCTCCTGC TCATCACCGC GGGCCTCGCC CTGCTGGCCG TTGCTCCGGC GGACGGTGAC
TACTGGCGCG ACGTCCTGCC CGCCATGGTG CTTCTGGGCG CCGGCGCCGG CCTCGGGTAC
CCGTCCTCCC TGACCATGGT GATGGCCGAT GCCACCGCCG CCGACCGGGG ACTGCGCTCC
GGGCTTGTCA ACACCACCCA GCAGGTCGGA CCGGCGATCG GCCTGGCCGT CCTGGCGACC
GTGGCCGCCG ACCGCACCAC GACGCTCGTC TCGCGGGGGA GCACGCACGC CGAGGCCCTG
ACCGGCGGAT ATCACCTGGC CTTCTGGATC GGGAGCGGGG CCAGCCTGGT CGCGCTGGTG
CTGACGGTGC TGTTCCTCAG GCCGGCGGTG CCGACGAGCG TACCGAAGAC CCTCGACCGG
GCCCGGGCCT CGCAGCGTCT GACCCAGGAC CACACCGGCC TGTCCGACCC GGATTTCCTG
GCTCTGGGCC TGGGCGGAAC CAACATGATG GCCATGCTCT GGTCGGTGGC CATGGGCAGG
CGTGCAGTGG GAGTGGAACT GCGCGGCTCG CCCTACGTGT CGGTGATGCG CTGGACGATG
CGCGAGGAGA TCTACCACCA CCTCGCGATG ATCGATTCGA TGATGCTGGA GCGGTACGGC
GAGGATCTGC TGCCGCGCCT CGGCGACGGC CGGCCGTTCA GACTGGCCGA CTGCTTCTTC
TCCCGGCACA CCAGGGCAGG ATCCGTGCGG GGCGACGAGG TGGTGACCGG CTTCGAGTCG
GACGCGCACA TCGGCGGTCT CGCCCGGCAC TACGAGACCA TCGACGACCG CTACCGGGAG
GGCCGGGCGC ATCGTGAGAT CAACGTCCTC GACCCCCTGG AGGGCCCGGA GGGGCTCGAC
CCCGCGGCGT TGGAGCACGA CCTCTCGGAC GTGCTGGGCA GCCAGTCGAT GTTCCAGGTC
GGGGCCGAGG AACTGCTCGT CATGCTCCGC CGGTACCTGG AGGGGCTGGA ACAGATCGAC
CGGGACCGGG GCGAAGCCCT GCCGCGGGTG CGCGTCCTGC CCTACCACCG GGTCGCCACG
TCGGAGTCCT CCGACCGCGA GCGCCGGTGG CTGCCCTCGG CGCTGCGCCG GACCCCGGTC
GCGGAACGGG GCTTCGAGCG CACGGCGGAC GGCCGGGTGC GGGTCCGGGT CGAGGCCGTG
CGCGAGCTGG ACTACCGGGG TGCCTTCCGC CGTGTGCGGG TGCCGTACAG CGAGACGGTC
GACCTCGGCA CCCCCGGGCT GATCATGATT GCCGAGGGGC TGGACAGCCC GGACGCGGCC
CGGCTGGGAT TCCGTCAGGA GACGGTGTGC GTGGACCGGG GCGACGGGCG GGGCCCTGTG
CCGGCCGAGG CCGACTTCCT GGTCGGCAAC GTCGACATCT ACCTCGCCGA CCGGATCCGT
GTCCGTCGCG CGTCGGAGTT CGACCAGGCG GGCAACGAGT ACTGGGTCCA CCAGCGGTGC
GTGGGGCACG AGGAGGACGC GCAGATCGGC TGGACGATGC TGGAGGTCCC GCCGTACAAG
ACGTTCGACC CGATCCAGGC CGGCCTGGTC CCGGCCGGGA CGCCGAAGGA CTCCAAGCCC
TACTTCGCCG GGCATCAGTT CCTGCTCCGG CGCTACTTCC TGGACCAGAC GGCACAGCTG
ACGGAGATCC CACGCCGGGC CATCGAGTAC AACCAGCTCT CCTACGGCCC CAAGCTCTTC
ACCGTGACGG AGCGGATCGG GCTCGACGCC CTGGTGGCCG CGAACGCGGT CGTGGCCGGT
GACTCCTTCG GCAACTCCCA CCACCTGACC AGCGGCGGCA TCAACACCGG CATGCTCGGT
CACGGCCTGC GGGTGCTGCG TTACTGGCAG GCCAGGGAGT CCGGTAGCAG CGCCAGCGAC
GCGGCGCGTG ACCTGGCCGA CGGGATCAGG GCGGACACCC GGGCGCTGAT CGACCTGTGC
GAGCAGGACT TCCGAGCGGC GCCGCCCGCG GCGCCCCCGA GGAAGCAGCA GCGACTGCTG
GCGGGAGCCA CCCGTCAGCG GCGTTCGATC TTCCCGCAGC GCTACCCGGA CGAGTGGAGC
CGCATCCAGC TCCGCACCGG CAAGATCTTC GCCTACAACC TGCCCATGCT CGATCCCGAG
CACCCCGACA CCCGCGAGGC CCAGCCGGTC GGCGCCATGT CGGGTGCCCC GCCGTCCGCC
AGCGAGCGGA AGGACCCGCT CGGCGCGGCT CGGGCATGA
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| Protein sequence | MSIFQPKGDS FGSLNETVQS RRLIVSRYRS LRERQWALLV LCTGALAIVI DTSIVNVALP
SIGQDLGFSA AGLSWVVNAY LIPFGGLLLF AGRLGDLVGA KRMFLAGIAL FTPASLVCGL
AQNPETLVAA RFVQGVGGAL AAAVVLGLVV STFPNAIEQA KAIGLYAFVS SAGAALGLLL
GAWITEALSW HWTFFINVPL GLLVLPLGAR LVDDERVVLD DRSIDVPGVL LITSGLMLTV
YTIVRFADGA TPLTWALVGI SAALLAAFVV RQRTARNPLV PLSIFRARNV AWANMVQALM
IAGMGGMFFL GTLYLRQVLG LSAMEVGLAF LPTALMVAVI SLKATPRLME KIDPKTVLVP
GLLLITAGLA LLAVAPADGD YWRDVLPAMV LLGAGAGLGY PSSLTMVMAD ATAADRGLRS
GLVNTTQQVG PAIGLAVLAT VAADRTTTLV SRGSTHAEAL TGGYHLAFWI GSGASLVALV
LTVLFLRPAV PTSVPKTLDR ARASQRLTQD HTGLSDPDFL ALGLGGTNMM AMLWSVAMGR
RAVGVELRGS PYVSVMRWTM REEIYHHLAM IDSMMLERYG EDLLPRLGDG RPFRLADCFF
SRHTRAGSVR GDEVVTGFES DAHIGGLARH YETIDDRYRE GRAHREINVL DPLEGPEGLD
PAALEHDLSD VLGSQSMFQV GAEELLVMLR RYLEGLEQID RDRGEALPRV RVLPYHRVAT
SESSDRERRW LPSALRRTPV AERGFERTAD GRVRVRVEAV RELDYRGAFR RVRVPYSETV
DLGTPGLIMI AEGLDSPDAA RLGFRQETVC VDRGDGRGPV PAEADFLVGN VDIYLADRIR
VRRASEFDQA GNEYWVHQRC VGHEEDAQIG WTMLEVPPYK TFDPIQAGLV PAGTPKDSKP
YFAGHQFLLR RYFLDQTAQL TEIPRRAIEY NQLSYGPKLF TVTERIGLDA LVAANAVVAG
DSFGNSHHLT SGGINTGMLG HGLRVLRYWQ ARESGSSASD AARDLADGIR ADTRALIDLC
EQDFRAAPPA APPRKQQRLL AGATRQRRSI FPQRYPDEWS RIQLRTGKIF AYNLPMLDPE
HPDTREAQPV GAMSGAPPSA SERKDPLGAA RA
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