Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3350 |
Symbol | |
ID | 3905932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3973516 |
End bp | 3975042 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637880675 |
Product | phage integrase |
Protein accession | YP_482436 |
Protein GI | 86742036 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0949526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAAAC GGTGCGGCTG CCGCGATCCC CAGACAGGCA AGGATTACGG CGCCCGGTGT CCGAAACTGC CCCGGTCGGA CCACGGTTCC TGGTTGTACA TACACGACGT CCCACCCGGT CCCAATGGGC GGCGGCGGCG CACCACCGGC GGACCGTTCG AGACCGAGAC GGAGGCCGAG GTCGCGTTGA CCGGTTCCCT GGCCGAACTC CATGGCGGTG GGCGGCCCGA CGACACCGGG CTCACCGTCG CCCGCTACCT CGACGACTGG CTCGATGGAA AGGCGAGTCT CGCCGCGTCC ACCCGCCGCT CGTATGAGGA GCACGTCCGC CTCTATCTCA AACCCGGCCT GGGACACCTC AGACTCGCTG ACCTGCGCGA CCACCACATC GAACAGCTCT ACGCCGCCAT GCGGCTCATC GGCCGGGATC TGCACGGCAG GAAACGCTCA CCCCTGCTCG TCCGCCTCCT CGAAGTCCGC AAAGACGACC CCAACCACCG CCGGCCCCTC AGCGCCTCCC GGCTACGCCG GGTGCACGCC ACCACCATGA GCGCGCTCAA CAGCGCCGTG AAACGTAAGA AACTTGGCGT CAATCCGGCC GAACACGTCG AACTACCCAA GGCCCGCAAG CCCCGACCGC TCGTCTGGAC CGCACCGCGG ATCGCCGCCT GGGAACGCAC CGGTAAACGG CCCTCCCCCG TCATGGTCTG GACCCCGCAG CAGGCCGGTG CCTTCCTCGA CTTCACCGTC GCCGACCGCC TTTACCCACT GTGGCATCTC ATCGCCCACC GCGCCCTACG TCGCGGTGAA GCCGTCGCCC TCGGCTGGAC CGAAATCGAC ATCGACGACG ACAGTATCTA CATCCTCGAC AACCTCCCCG GATCCGTTTC CGGCGCCGAC GACAACCTCG ACCTGGACGG CGACGAATAC ACCGAACCCA AAAGCGACGC CGGCTACCGT ACTGTCAGCC TGGACCCGGC TACAAAAAAC GTCCTCACCA CCTGGCAGGC GCGCCAAGAC GAGGAACGCG CCGCTTACGG TAAGGCCTGG GTCGACAGCG GACGGATGTT CACTCATCCC GATGGCAGCA GGCTCACCCC CAACGGCGTC TCGCAACGCT TCGAACGGCT CATCACCCGA TTCGCCACCA TCCGCCATGA GCACGCCGAA CACAGCTGGA CCGTCGACCA GCTCGCCGCC CGGCATTTCA TGCCCGAAGA CGCCATTCAG ACCGCGCTCG CCTTCGGCCC CCTGCCCCCG ATCCGACTGC ACGACCTGAG GCACACCGCC GCCAGCCTCA CCTACCGGGC CACCAAGGAC CTCAAGGTCG TCTCCGAACT CCTCGGACAC TCCTCCGTCC ACTTCACCGG CGACGTCTAC ACCTCGGTCT TCGCCGACGC GGATCGCGCC GCGGCCAAAG CCGCCGCCGA CATCGTCCCC CGCCGACACC CACCCGGCCA GGTGGAACCC GACAGCTTGG ACGACCCCAC ACCACCCCCC GCCAACGGAC CTGGCCTCGA CCTGTAG
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Protein sequence | MFKRCGCRDP QTGKDYGARC PKLPRSDHGS WLYIHDVPPG PNGRRRRTTG GPFETETEAE VALTGSLAEL HGGGRPDDTG LTVARYLDDW LDGKASLAAS TRRSYEEHVR LYLKPGLGHL RLADLRDHHI EQLYAAMRLI GRDLHGRKRS PLLVRLLEVR KDDPNHRRPL SASRLRRVHA TTMSALNSAV KRKKLGVNPA EHVELPKARK PRPLVWTAPR IAAWERTGKR PSPVMVWTPQ QAGAFLDFTV ADRLYPLWHL IAHRALRRGE AVALGWTEID IDDDSIYILD NLPGSVSGAD DNLDLDGDEY TEPKSDAGYR TVSLDPATKN VLTTWQARQD EERAAYGKAW VDSGRMFTHP DGSRLTPNGV SQRFERLITR FATIRHEHAE HSWTVDQLAA RHFMPEDAIQ TALAFGPLPP IRLHDLRHTA ASLTYRATKD LKVVSELLGH SSVHFTGDVY TSVFADADRA AAKAAADIVP RRHPPGQVEP DSLDDPTPPP ANGPGLDL
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