Gene Francci3_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3339 
Symbol 
ID3904125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3960904 
End bp3961641 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID637880664 
Producthypothetical protein 
Protein accessionYP_482425 
Protein GI86742025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0934778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.651768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAG ACGTCGCACT CGACAAAATC CGCAAACTCC TCGCGATGGC GGAAGCGGAC 
GGCATCAGCG AGCAGGCCCG CGAAAGCTAC AACCTGAAAG CCACCGAGCT CATCGCCCGC
TACGGCATCG ACCAGGCCCG CCTCGACGCC CGACAGAACC GCCCCGCCAC CCCCAGCGAT
ATCCGCCTCG ACATGGACCC GCCCTACGCC CGCGACAAGC TCAACCTGCT GTCCTCCATC
GCTGTCCCCC TCGGCTGCCA GATCGTCTCC CACACCCGCC GCGACCCCGA CCGGCTCCGC
CAGCAGGCCC ACCTGTTCGG GATGACCGCC GACCTCGACC GCGCCCAGAT CCTCTACACC
TCCCTGCTCG TCCAGTCCTC CTACGGCATC ACCGCCGCCC GCATCCCCAC CGGGGAAAAC
CCGCGCGCCT TCCGCCGCTC CTGGCTCGCC GGCTTCGCCG TCGCCGTCTA CAAACGGCTC
ACTGCCGCCG AAGCCGCCGC GAAAGCCCGC GCCCTGCGCG AAGACACCAC CAGCACCGGA
CCGTCGACCG CCCTCGTCCT CGCCGACCGC GCCACCCTCG TCCAACGCCA CCTCACCCAC
ACCTACCCCC GGCTGCGCAA GGGACGAGCC CGCCAGCTCT CCGGCTCCGG CGGCCGCGAC
GGCTACCACG CCGGCGAACG CGCCGACCTC GGCGGCACCC GCCTGACCCC CACCCAGCGG
CCCGCTCTCG GCAGCTAA
 
Protein sequence
MQPDVALDKI RKLLAMAEAD GISEQARESY NLKATELIAR YGIDQARLDA RQNRPATPSD 
IRLDMDPPYA RDKLNLLSSI AVPLGCQIVS HTRRDPDRLR QQAHLFGMTA DLDRAQILYT
SLLVQSSYGI TAARIPTGEN PRAFRRSWLA GFAVAVYKRL TAAEAAAKAR ALREDTTSTG
PSTALVLADR ATLVQRHLTH TYPRLRKGRA RQLSGSGGRD GYHAGERADL GGTRLTPTQR
PALGS