Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3339 |
Symbol | |
ID | 3904125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3960904 |
End bp | 3961641 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880664 |
Product | hypothetical protein |
Protein accession | YP_482425 |
Protein GI | 86742025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0934778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.651768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAG ACGTCGCACT CGACAAAATC CGCAAACTCC TCGCGATGGC GGAAGCGGAC GGCATCAGCG AGCAGGCCCG CGAAAGCTAC AACCTGAAAG CCACCGAGCT CATCGCCCGC TACGGCATCG ACCAGGCCCG CCTCGACGCC CGACAGAACC GCCCCGCCAC CCCCAGCGAT ATCCGCCTCG ACATGGACCC GCCCTACGCC CGCGACAAGC TCAACCTGCT GTCCTCCATC GCTGTCCCCC TCGGCTGCCA GATCGTCTCC CACACCCGCC GCGACCCCGA CCGGCTCCGC CAGCAGGCCC ACCTGTTCGG GATGACCGCC GACCTCGACC GCGCCCAGAT CCTCTACACC TCCCTGCTCG TCCAGTCCTC CTACGGCATC ACCGCCGCCC GCATCCCCAC CGGGGAAAAC CCGCGCGCCT TCCGCCGCTC CTGGCTCGCC GGCTTCGCCG TCGCCGTCTA CAAACGGCTC ACTGCCGCCG AAGCCGCCGC GAAAGCCCGC GCCCTGCGCG AAGACACCAC CAGCACCGGA CCGTCGACCG CCCTCGTCCT CGCCGACCGC GCCACCCTCG TCCAACGCCA CCTCACCCAC ACCTACCCCC GGCTGCGCAA GGGACGAGCC CGCCAGCTCT CCGGCTCCGG CGGCCGCGAC GGCTACCACG CCGGCGAACG CGCCGACCTC GGCGGCACCC GCCTGACCCC CACCCAGCGG CCCGCTCTCG GCAGCTAA
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Protein sequence | MQPDVALDKI RKLLAMAEAD GISEQARESY NLKATELIAR YGIDQARLDA RQNRPATPSD IRLDMDPPYA RDKLNLLSSI AVPLGCQIVS HTRRDPDRLR QQAHLFGMTA DLDRAQILYT SLLVQSSYGI TAARIPTGEN PRAFRRSWLA GFAVAVYKRL TAAEAAAKAR ALREDTTSTG PSTALVLADR ATLVQRHLTH TYPRLRKGRA RQLSGSGGRD GYHAGERADL GGTRLTPTQR PALGS
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