Gene Francci3_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3329 
Symbol 
ID3904115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3946290 
End bp3947393 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content75% 
IMG OID637880654 
Producthypothetical protein 
Protein accessionYP_482415 
Protein GI86742015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0259928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCAC CAGCGCCGAT CCCACCACCT GCCAGTAGTA GCCGCGGCCC GTCCCGCGGC 
GGGCGGCCAC CCCGCCCGCC GACGAGCCCT CCGTCGACGA GCCGTCCGCA ATGCCGGAAG
CAGCCCGGTC GAACTGGCCG TGGTAATGGG CGGGGTCATG ACCCTCCTCG TGATCGTCCT
CGGGTTGGGT CTGCGATGGC TGGCTGTTCA GGCGGCCGGC GCCTCCGCGC AGCGCGCCTT
GGAGATCATG CAGAGCCCCG ATGGGACCGT CGAGGACGCC ACAGCGGTCG CGGACCGGCT
CGCCCGATCC AGCCGGTCGG TCACCAGCGT GACGACGGAT GTGGCGGTCA CGCCGGATCT
GGTAACCGTG ACGGTGACCG TCACCTCGGT CCTGGGCACG ACGGTTGCCC GCTCCGCCTC
CGGGCCACGG CTGCGGTTCG TCCCACAACC GGTGGCACCA GAGCGCGCCG CATCGACGAG
GACCGCGCCG CTGGCCGTCG GCGGACCGGT GCCCGCCGGC GCGGGTCGGA CGTCATGAGC
GGCTGGTGCC GGTGCCGGTG CCGGTGGCGG TGCCGGTGGC GGTGGCGGTG GCGGTGGCGG
TGGCGGTGGC AGTGGCGGTG CCGGTGGCTT GGCGCGGGCG GTGCGGGCAT GCCGCTCGCG
GATCGGGTCG GAGCTCGCGC GGGTCGGGAG GGGGCGTCGG AACAGGACCG CGACCGGGGG
GCCTACTCGG TCGAGTTCGC CGCCGGATGG CTGATCTTCC TGATGGCCGT GGCGATCCTC
GCGGTGGCCT TCCAGGCTCA GCAGGCCCGA AGCGGTGTCC GGCACGCCGC CCGGGAAGGC
GCCCGGGCCG CCTCGCTCGC CGCGACCCCC GCCGACGCCG AGCAGCAGGC CGACATGGTC
GCGCGCCGTG CGCTCACCGC CAGCTCCTGC GCGGCGGGCA GCGAGACCGT CTCCACCGAC
GTGACCGGGT TCGGCGCCGG CGGGGTCGTC ACGGTCACCG CCGGATGCCG CGTCCACCTC
GTCCTCGGCC CGTCCCGCAC CGTCACGGCG AGCCGCGACG AGGTCATCGA CCGGTTCCGC
GGCGGCCTGC GGGACCGCCC GTGA
 
Protein sequence
MYAPAPIPPP ASSSRGPSRG GRPPRPPTSP PSTSRPQCRK QPGRTGRGNG RGHDPPRDRP 
RVGSAMAGCS GGRRLRAARL GDHAEPRWDR RGRHSGRGPA RPIQPVGHQR DDGCGGHAGS
GNRDGDRHLG PGHDGCPLRL RATAAVRPTT GGTRARRIDE DRAAGRRRTG ARRRGSDVMS
GWCRCRCRWR CRWRWRWRWR WRWQWRCRWL GAGGAGMPLA DRVGARAGRE GASEQDRDRG
AYSVEFAAGW LIFLMAVAIL AVAFQAQQAR SGVRHAAREG ARAASLAATP ADAEQQADMV
ARRALTASSC AAGSETVSTD VTGFGAGGVV TVTAGCRVHL VLGPSRTVTA SRDEVIDRFR
GGLRDRP