| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3318 |
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| Symbol | |
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| ID | 3904104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3933219 |
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| End bp | 3933995 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637880643 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_482404 |
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| Protein GI | 86742004 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.517623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCACTC CTGCTGATCT TCGTACCTAT GTGATCAACC TGCTTCGGCG ACCTGACCGG
CGGGCACGGA TGACGCACGT GCTTCCGCCG GAGCTCAAGG CGACGTTCAC CTCGGACTGG
CGCGGCCTCT TCGACGGCCT GAACCTCACC CGAAGCCAGC TCGACGCTGC CGGCTACACC
CTCTTTCCCT GGCAGATCGA GTCCGACAAT CCCTGGTGGG CCAGACCCCT GAAGTACGGC
GAGATCGGCT GCACACTGGC GCACCTGGCC TGCTGGCGCC ATGCCGCTCA AACCGGTGAC
GAACCATTCA TCGTCTTCCT CGAAGACGAC CTCGTCATCC CGGACGCCTT CCTCGACCAG
CTCCTCGCCG GCCTGCACCA GTTGACCCGC CACGGCCCCT TCGACCTGCT CTACCTCGGC
CGCTTCCCCC TCGAACCCGA CCACGACCAG CCGGTCCTGG ATGGATTCGT CTCGCCTGGT
TACAGCCACT GCACCTTCGG CTACCTGCTC ACCAGGCCCG GTCTCGGCCT GGTGCTTGCC
GCCCACATCG AAGAGGCCGT CGTGCCGGTC GACGAGTTCC TGCCCGCGCT CTACATCGAC
CATCCGCGCC CTGATCTACG CGCCCGGTTC CGCCGACGGC TGACCGCCCT CGCGTTCGAA
CCACCACTGG TCTCCCAGCG CCCCAAGGAT GAGGCCGGAA GCGACACCGA ACGTTCGGCT
TTCGTCGAGC CCAGAGACCG GCAGCCAGAA CAGGGGGCGG CGAACCCTCG CCGTTAG
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| Protein sequence | MITPADLRTY VINLLRRPDR RARMTHVLPP ELKATFTSDW RGLFDGLNLT RSQLDAAGYT
LFPWQIESDN PWWARPLKYG EIGCTLAHLA CWRHAAQTGD EPFIVFLEDD LVIPDAFLDQ
LLAGLHQLTR HGPFDLLYLG RFPLEPDHDQ PVLDGFVSPG YSHCTFGYLL TRPGLGLVLA
AHIEEAVVPV DEFLPALYID HPRPDLRARF RRRLTALAFE PPLVSQRPKD EAGSDTERSA
FVEPRDRQPE QGAANPRR
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