| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3296 |
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| Symbol | |
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| ID | 3904082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3902288 |
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| End bp | 3903724 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880621 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_482382 |
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| Protein GI | 86741982 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0979413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAGA CGATCGCCTT CCTGCGCGCG GCGGGAGGCG ACACCACCGA GGTGGAGGTC
AAGTCTGCCG CCGGCGGGTT ACCCGCCTCG TTGACCTCTA CGCTGAGCGC GCTGGCGAAT
CAGCCCGGGG GCGGGACCAT CATCCTGGGA CTCGACGAGC GGGCCGGGTT CCGCCCCGTC
GAGCTCAGCG ACCCGCAGGT ACTCAAGCAG GGCCTGGCTG CCAGGGCCCG GGCATTCACA
CCGCCGGTCC GTCTCACGAT CGAAGACGGG GAGGTTGACG GGGCCGCGGT CGTGGTTGCG
CAGGTCCAGG AGTGCGACCG GTCGACCAAG CCCTGTCGCG TCACCGCGAC CGGCAGGGCG
TACCTACGTG GCTACGACGG CGACTACGCC CTGTCTGACG TGGAGGAACA GGGGTTCCTG
GCCGCTCGCC AGCCACCGCT GTTCGACCGT TCACCTGTCG AGGACGCCAC CATCGACGAG
CTGGACACCG AACTCGTCGA TGCTTTTCTA CTCGCTGTCC GCGAACGCGA CCCGGCCGGG
CTCGGCCGTT TTCCCGACGA CACCGAGCTC CTACGCCGGG CTGGGGTCAC GATGGATGGC
GGGCAGCCAA CTGTCGCGGG ACTGCTCGCT CTCGGGGTCC ATCCCCAACA GTGGTTCCCT
CGCTACGTCA TCCAAGCCGC CGCGCAGCCC TTGCCCACCG GCTCCGCCGC AACGCGGGCC
CGCAACCAGG TCACCATCAG CGGACCGGTC CCGCGGATGC TCGACGCGGC GCTGCTCTGG
GCCCGACATA CCTTCGACAC CGCCATCGTC GCCGAGATGG ACGGCAGCGT TCGTGACCGT
CCGATCTACC CACTCGTCGC CTTCCGTGAG CTGGTCGCCA ACGCGCTGAT CCACCGCGAC
CTCGATCACT GGTCCGCCGG GCTGGCCGTC GAAGTGCGGC TTCTGCGGGA CCGCCTGGTA
GTGACCAATC CCGGCGGCCT GTACGGCATC ACCGTCGACC GGCTCGGACG CGACGCGGTG
ACCTCCGCCC GCAACGCCAG CCTGGTCGCG ATCTGCCAGC ACGTCCGCTC TGCGCAGACC
GGAGCTCGGG TTATCGAAGC CCTCGCCAGC GGGATTCCCA CCGTCACCGA GGCTCTCGCC
GACTGTGGCC TGCCGTCAGC CCACTACGTG GACAGCGGCA TCCGGTTCAC CGTCATCCTC
CACCAGTTCG CGACCGCCAC GCCCGTGGCA ACCGCCGAGC CCCCGCTGGG CGCCACGGAG
CGTCGCGTCT ACCAGGCCCT GACCCGTCAG GGACGAACAG TCAGCGACCT CGCCGAAGAG
CTCGGGCTGT CCGCTCCGAA CATCCGCAAG GCCCTGCGAA ACCTGCGCGG CCGCGGGCTG
ATCCTTCAAC TCGGCGGCAG AGGCAGGGCC ACCACCTACC AGCGGACGGA CTCATAG
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| Protein sequence | MSQTIAFLRA AGGDTTEVEV KSAAGGLPAS LTSTLSALAN QPGGGTIILG LDERAGFRPV
ELSDPQVLKQ GLAARARAFT PPVRLTIEDG EVDGAAVVVA QVQECDRSTK PCRVTATGRA
YLRGYDGDYA LSDVEEQGFL AARQPPLFDR SPVEDATIDE LDTELVDAFL LAVRERDPAG
LGRFPDDTEL LRRAGVTMDG GQPTVAGLLA LGVHPQQWFP RYVIQAAAQP LPTGSAATRA
RNQVTISGPV PRMLDAALLW ARHTFDTAIV AEMDGSVRDR PIYPLVAFRE LVANALIHRD
LDHWSAGLAV EVRLLRDRLV VTNPGGLYGI TVDRLGRDAV TSARNASLVA ICQHVRSAQT
GARVIEALAS GIPTVTEALA DCGLPSAHYV DSGIRFTVIL HQFATATPVA TAEPPLGATE
RRVYQALTRQ GRTVSDLAEE LGLSAPNIRK ALRNLRGRGL ILQLGGRGRA TTYQRTDS
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