Gene Francci3_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3292 
Symbol 
ID3904078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3899157 
End bp3899564 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content65% 
IMG OID637880617 
ProductPilT protein-like 
Protein accessionYP_482378 
Protein GI86741978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0750661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTG CGGTCGACAC GAGTGTCGCG GTTCCGCTCC TGGTACGTTC GCACACGCAC 
CACGCGGATG TGGTGCAATG GTGGGGCGGG CGGGAGCTTG CGCTGAGTGG GTATGCGCTG
GTGGAGACCT ATTCGGTACT CACCAGAATG CCCGGCGACG CGAGACTGTC CGGGCCGGAC
GCCGCGCGTC TGCTCGACGT GCGCTTCACT GCACCGTTAA CGTTGAGCGG ACCGCATGCG
CGGAAGGTTC ACGCGACGTT GAGTCGCGTC GGTATTGTTG GGGGCGCCGT CTACGATGGG
CTGGTGGCTT TGGCTGCCAA GGAGCACGGC CTGGCCCTCG CGACGAGGGA TGCTCGCGCA
CGCGGGACCT ATGACGCGCT TGGAGTCAAG GTCATTGTTG TCGCTTGA
 
Protein sequence
MTIAVDTSVA VPLLVRSHTH HADVVQWWGG RELALSGYAL VETYSVLTRM PGDARLSGPD 
AARLLDVRFT APLTLSGPHA RKVHATLSRV GIVGGAVYDG LVALAAKEHG LALATRDARA
RGTYDALGVK VIVVA