Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3292 |
Symbol | |
ID | 3904078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3899157 |
End bp | 3899564 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637880617 |
Product | PilT protein-like |
Protein accession | YP_482378 |
Protein GI | 86741978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0750661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATTG CGGTCGACAC GAGTGTCGCG GTTCCGCTCC TGGTACGTTC GCACACGCAC CACGCGGATG TGGTGCAATG GTGGGGCGGG CGGGAGCTTG CGCTGAGTGG GTATGCGCTG GTGGAGACCT ATTCGGTACT CACCAGAATG CCCGGCGACG CGAGACTGTC CGGGCCGGAC GCCGCGCGTC TGCTCGACGT GCGCTTCACT GCACCGTTAA CGTTGAGCGG ACCGCATGCG CGGAAGGTTC ACGCGACGTT GAGTCGCGTC GGTATTGTTG GGGGCGCCGT CTACGATGGG CTGGTGGCTT TGGCTGCCAA GGAGCACGGC CTGGCCCTCG CGACGAGGGA TGCTCGCGCA CGCGGGACCT ATGACGCGCT TGGAGTCAAG GTCATTGTTG TCGCTTGA
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Protein sequence | MTIAVDTSVA VPLLVRSHTH HADVVQWWGG RELALSGYAL VETYSVLTRM PGDARLSGPD AARLLDVRFT APLTLSGPHA RKVHATLSRV GIVGGAVYDG LVALAAKEHG LALATRDARA RGTYDALGVK VIVVA
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