| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3279 |
|---|
| Symbol | |
|---|
| ID | 3904450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3882835 |
|---|
| End bp | 3883953 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637880604 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482365 |
|---|
| Protein GI | 86741965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.579337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAG ACACGATGGC GAAGCTGGCT GGTGGCTGGG CCGTTCCGCT CGGCGGGGAC
GCGCTGTTCA CCTGGGACTA CGACGCCGGC ACCGAACAGA TGCTGAACCT GTACTCCCGC
GGCAAGCAGC GCCAGTGGGA CGCCGAGACG CAGCTGGACT GGAGCCACGA CGTCGACCCG
GACAACCCGC TCGGCCTGCC CGACGAGTTC ATCTGGATCG CGGGGACGCG GGTATGGGAG
CGCCTGCCGG AGGCGGAGCG GACCACCGTC CGCCAGCACA TAGCCGGGTG GCTCTATTCC
CAGTTTCTAC ACGGTGAGCA GGGCGGCCTG GTGTGCTCGG CTAAGGTCGT CCAGGCCGTG
CCGGACATCG CCTCGAAGTT CTACGCCGCC ACGCAGGTGA TGGACGAGGC CAGGCACGTC
GAGGCGTACC AGCGCATGCT GCAGGCAAAG ATCAAAGTGC ACTACCCGAT CTCCACCGGT
CTGCGCGGCC TGCTTGAGGC GATCATCGGT GACAGCCGCT GGGACATCAC CTACCTCGGC
ATGCAGGTGA TGATCGAGGG CCTGGCGCTG GCGGCGTTCA GCATCCAGCG CGACCGGATG
CGCGATCCGC TGGCGCAGGC GCTCAACGCC TACGTGCTGC AGGACGAGGC GCGTCATGTC
GCGTTCGGAC GGTTGGCACT GCGCGACTAC TACAGTCAGC TCAGCACCGC CGAACTGCGT
GAGCGGGAGG ATTTCGCGGT CGAGGCGTGC TGGGTGCTCA AGGACCGGTT CGTCGGCGAG
GAGATGTGGC GCAAACTCGA CTACGGCGCC GAAGAATGCA TCGCGCTGGC CAACCGCTCG
CCCGCCCAGC GCGAATTCCG GCGCCGGGTG TTCACCCGGA TTGTCCCAAC GCTGAAGGAC
ATCAACCTGT TCGGCCCCAG GATGCAGGAG AGCCTGCGTG AGCTGGGCGT CCTCGGGTTC
AGCCGGGTCG ACGGGGCCGA GATAAGCGCC GAGGACGAGC GGATCGCCGA CGAAATCGCC
AGGCTGGAGT TTGCCACTCG GCAGCGGGAA GTGTCCGCGG TCATAGCCGT CGGCGCCGGG
TCCGACGACG GCGACGACGA CTGCGAGGAC GAGGGATGA
|
|---|
| Protein sequence | MKSDTMAKLA GGWAVPLGGD ALFTWDYDAG TEQMLNLYSR GKQRQWDAET QLDWSHDVDP
DNPLGLPDEF IWIAGTRVWE RLPEAERTTV RQHIAGWLYS QFLHGEQGGL VCSAKVVQAV
PDIASKFYAA TQVMDEARHV EAYQRMLQAK IKVHYPISTG LRGLLEAIIG DSRWDITYLG
MQVMIEGLAL AAFSIQRDRM RDPLAQALNA YVLQDEARHV AFGRLALRDY YSQLSTAELR
EREDFAVEAC WVLKDRFVGE EMWRKLDYGA EECIALANRS PAQREFRRRV FTRIVPTLKD
INLFGPRMQE SLRELGVLGF SRVDGAEISA EDERIADEIA RLEFATRQRE VSAVIAVGAG
SDDGDDDCED EG
|
|---|
| |