Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3265 |
Symbol | |
ID | 3904436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3867661 |
End bp | 3868083 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637880590 |
Product | transposase IS200-like |
Protein accession | YP_482351 |
Protein GI | 86741951 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.488417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGA CGGTGCAGGT CGGCGCGGGT GGCGCCTATG ACCTCGGTTA CCACGTCGTG TGGTGCCCGA AGTACCGCCG TGCTGTCCTC GTCGGTCCGG TCCGAGACCG GCTTGACGGG CTGATCCGCG AGAAGTGCGC CGAGCATGAC TGGCTGATCG TCGCGCTGGA GATCGAGCCC GACCACGTGC ACCTGTTCGT GAAAGCTCAT CCGAAGCACG CCCCGTCGTA CATCGCCAAC CAGCTCAAAG GCTTCACGTC CCACGTGCTA CGCGGCGAGT TCGCGCACCT GCGCTCCCGG CTGCCCACGC TCTGGTCCCG GTCGTACTTC GTTGCCACCG TCGGCGCGGT GTCCGCCGAG ACGGTCCGCC GGTACATCGA TACGCAGAAC GAGCGGCCGT GGCGCACGGG GGTGCCACGT TGA
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Protein sequence | MSRTVQVGAG GAYDLGYHVV WCPKYRRAVL VGPVRDRLDG LIREKCAEHD WLIVALEIEP DHVHLFVKAH PKHAPSYIAN QLKGFTSHVL RGEFAHLRSR LPTLWSRSYF VATVGAVSAE TVRRYIDTQN ERPWRTGVPR
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