| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3256 |
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| Symbol | |
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| ID | 3904427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3855411 |
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| End bp | 3857897 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880581 |
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| Product | WD-40 repeat-containing serine/threonin protein kinase |
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| Protein accession | YP_482342 |
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| Protein GI | 86741942 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.380314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC GTGAAGGTCA GGTTCCGGCG GGAGGGGGCG GCCGTGGGTT CGCAGACCGC
GCGGCGACGG TTGCCGTGAC GACGCCTGAC GGGTCAGTTC CGTGGGACGT GGCAAACTCC
CGCGCGACAC CGCTGCTCGA CAGTGACCCC GTGACTGTCG GGACGTACCA GCTCGTGGCG
AGGCTGGGCC AAGGCGGGAT GGGAATCGTC TACCTCGGCA GGAGCCGGGA CGGGCGGCCC
GTGGCCGTCA AGGTGGTCCG TACCGACCTC GCGCGGCAGC CCGAGTTCCT GGCCAGGTTC
CGTCGTGAGG CCGAAGTCGC CCAGCGGGTC GCCAGATTCT GCACCGCGGA GGTGCTTGAG
GTCGACGTCG AGGCCGATCG CCCGTACCTG GTGACGGAGT TCATCGACGG TCCCACGCTC
GCGGACGCGA TCGCCGCCAA CGGTCCCATG GCGGAGGCCG ACCTCGAACG CCTCGCCATC
TCGGTCGCGG CGGCGCTCAC CGCCATCCAC GCCGCGGGAA TGATCCACCG TGACCTGAAG
CCGTCGAACG TCCTGCTGTC GCGGCTCGGT CCGCGGGTCA TCGACTTCGG CATCGCGCGC
GCGATGGATT CCACGACCTC GCTGACGACC TCCACCGGCC TGATCGGCAC CCCCGCTTTC
ATGGCTCCCG AACAGGCGCG CGGCGCGCTG GTCACGGCGG CCGCGGACAT CTTCGCCTGG
GGCGGGGTGG TGACGTTCGC GGGCACCGGG ATCGGCCCGT TCGGCAAGGC GACGACCCCG
GTCCTGCTGT ATCGAGCGGT GCACGAGGCG CCCAAGATCG ACGGCCTGCC CGACGGACTC
CGTTCGATCG TGGCGAAAAC GATGTCCAAG GAGCCGGCGG ACCGGCCGAC CGCCAGCGAT
CTCTACCAGT CCCTCCTCGG CCTGTCCAAC GTTGACGAGG CGGTGCGAGG CGAAGCTGGC
CCAACCGCCG TCACCGTGGT CACGGATCCG CCGGTCAAGC CGCCGGCGCG CATGGACGCC
GGAGCCTCGC GGACACCGTC CGACTCCGTG GGTTCCGTGG GTTCCGCCAA CCCGGCGATG
CCACCGCCGA GCGACGACAT CCTGTCACCA CTGGACCTGT CGCCACTGGA CCGTCCGGCA
CCCGGCCGCG GCTACCCCGA GGGTGGCGAG CCGAAGCAGC AGCAGCGGCA GCGGCGCGGC
CGGTGGCAGC GGCGCACGGT GGTGTCGCTG GTGGCCAGTC TCTGCGCCGT CGCGGTAGCG
GTGACGGCCA CCCTCATGTT CGTCACCCAC AAGGACCCCG CTTCGGTCCC CGAGAGCATC
GAGGTGTCGC GCCGGCTGGC GAGCGAGGCG GCGGCGGCTA GCACGACACA ACCGCAGCTG
GCCCGCCAAC TTGCGCTGGC GGCCTACCGC GTCGAGCCCA CCGAGGAGGC CCAGCGCAGC
CTGATTGAGA ACTTCGGCGG GGTAGAGATC AATACGCTGG TTGGCCACAC CGAGCGGGTG
ATCGGAGTAC GGTTCAGCCC CAACGGCAGA ATGCTGGTGA CGGGAAGCGA CGACAGCACC
GTCCGGCTCT GGGACATCAG CAACCCCATG GCCACCAGAC CGCTCGCGGT CATCCCGGGG
GACAGCGGCA CCTTCCTGCA GGGCGGCTTC AGCGCGGACG GGCGGCTGCT GTCGACGTCC
ACCGACGACC ACATTGTCCG GCTCTGGGAC ATCTCCGTGC CCGAGCGGCC CAGGTCGCTG
GCGGTGCTGC GGGACGTCAA CAACAGCGTC GCCTTCGCGG TCGGCGGAAA GACCATGGCT
ACCGCCGGCA CCGACAACAC CGCCAAGTTG TGGGACATCA CCGATCCCCA CCAGCCGCGG
CTGGCGGCCA CCCTCGTGGG ACACACCGAC TGGGTCAACA CCGTGGCGTT CAGCCCGGAC
GGGAGAATGC TCGCGACCGG CAGCCACGAC CGGACCATCC GGCTCTGGGA CGTGTCGACC
CCGACCCGGC CCACGCCGCT CGCGATCCTC AACGGGCACG AGAACGCGGT GCTCGGGCTC
GCCTTCCGGC CCGACGGCAG GATCCTCGGA TCGACGTCGG CGGACCGGTC CGCCCGGCTA
TGGGACATCG CCACGCCGAC GGAACCGAAA ATGCTATACA CCTTCACCGA CCGATCGGAC
TGGGTGAGTA GCGTTGCCTT CCGCGTCGAC CTGCACCTGA TGGGCACGAC CGCGCGGAAG
GCCGCCCGGC TGTGGGACAT CTCCGACCCG CGCAATCCCC GCCCGGTCGG CGGCCTGCTC
GGACACACGG CGACGGTGCG GCGCGTCCAG TTCAGCCCGG ACGGCACACT GGCCGCCACC
TCCGGCGACG ACAACACCGC CCGGTTGTGG GACATCGACC CGGCCCATAT CGCCAAACGT
GCCTGCACCG ATCCGACAGC CGTGATGAGC GAGGCCGAGT GGGAGCGGCA CGCCCCGCAG
ATCCCCTACC CGTCGCGGTG CCCATAG
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| Protein sequence | MSAREGQVPA GGGGRGFADR AATVAVTTPD GSVPWDVANS RATPLLDSDP VTVGTYQLVA
RLGQGGMGIV YLGRSRDGRP VAVKVVRTDL ARQPEFLARF RREAEVAQRV ARFCTAEVLE
VDVEADRPYL VTEFIDGPTL ADAIAANGPM AEADLERLAI SVAAALTAIH AAGMIHRDLK
PSNVLLSRLG PRVIDFGIAR AMDSTTSLTT STGLIGTPAF MAPEQARGAL VTAAADIFAW
GGVVTFAGTG IGPFGKATTP VLLYRAVHEA PKIDGLPDGL RSIVAKTMSK EPADRPTASD
LYQSLLGLSN VDEAVRGEAG PTAVTVVTDP PVKPPARMDA GASRTPSDSV GSVGSANPAM
PPPSDDILSP LDLSPLDRPA PGRGYPEGGE PKQQQRQRRG RWQRRTVVSL VASLCAVAVA
VTATLMFVTH KDPASVPESI EVSRRLASEA AAASTTQPQL ARQLALAAYR VEPTEEAQRS
LIENFGGVEI NTLVGHTERV IGVRFSPNGR MLVTGSDDST VRLWDISNPM ATRPLAVIPG
DSGTFLQGGF SADGRLLSTS TDDHIVRLWD ISVPERPRSL AVLRDVNNSV AFAVGGKTMA
TAGTDNTAKL WDITDPHQPR LAATLVGHTD WVNTVAFSPD GRMLATGSHD RTIRLWDVST
PTRPTPLAIL NGHENAVLGL AFRPDGRILG STSADRSARL WDIATPTEPK MLYTFTDRSD
WVSSVAFRVD LHLMGTTARK AARLWDISDP RNPRPVGGLL GHTATVRRVQ FSPDGTLAAT
SGDDNTARLW DIDPAHIAKR ACTDPTAVMS EAEWERHAPQ IPYPSRCP
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