| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3252 |
|---|
| Symbol | |
|---|
| ID | 3904423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3850784 |
|---|
| End bp | 3852388 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637880577 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482338 |
|---|
| Protein GI | 86741938 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2187] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACC CGAGCATGCT GCCGCGGCCG CCGGGACGCG GGCAGGCTCG TGCCATGAGT
CTGGAGACCA CGGTGAACCC GCTCCCGGCG GAGCGAGGCG CCTCGGCCTC GGCGCCAGCG
GTGGCGCCGA CGGTGGCGTC GGGGCCTCCT GCCAGGGTCG TCGAGACGGC GCGGTCCGTG
CTCGTCTTCC TTGGAGATCG TGTCTTCAAG GTCAAGAAGC CGGTCGACCT CGGTGCCGTG
GATTTCCGCG GCAGGCAGGC GCGGTTGGCC GCCTGCGAGG CCGAGGTGAG ACTCAATCGT
CGCCTCGCGC CCGACGTCTA CCTCGGCGTC GCCGATGTCA TCGGACCGGA CGGGGAGCCC
TGCGACCACA TGGTCGTGAT GCGGCGACTA CCCGAGGCGC GCCGGCTGTC GACGCTTGCC
GAAGGTGGCA CCGAGGTCAG GGCGGAGATC CACGCCCTCA CCCGGGTGCT GGTCGACTTC
CACGCCCGGT GTGAGACCTC GTCCCGGATC GCCGAGGCAG GTGGCCTGGA CCGTCTGCGT
GGGCGGTGGG ACGCCTGCTT CGCCCGGGTA CAGCGTGACC ATGGCGCGGC GGTGAGCGCC
AGCATCCTCG ACCATGTGAA CCGTCTCGCC GTGCGGTACC TCGACGGCCG CGACGAGCTC
CTGCGGGAGC GGCGCGAGGC CGGGCGGATC CGCGACGGGC ACGGCGATCT GTCCGCCGCG
GACATCTTCT GCCTCGACGA CGGGCCCAGG GTGCTCGACT GCCTGGAGTT CGAACCCGGG
CTGCGGGCGG CCGACGTCCT CGCGGACGCC TGCGCCCTGG CAGCCGACCT CGAGTGGCTC
GGACGCCGCG ATCTCGCCCG GCTCTTCCTC GATCACTACC GTGAGATGGC TGGTGAGACC
CATCCTCGGT CGCTCGAGGA TTTCTACTGG GCGCTGGCCG CGCTGGGGCG CTGCCAGGCG
GCGTGCCAGC GTGTCGCGGC CGGCGAGAAC GCGGCGGCGG AGGCGCGGGC CTTCGCTGAC
CTGGCACTGG CCCGGTTGCG CTGGGGCCGG GTCCGACTCG TGCTGGTCGG CGGCCAGCGC
GGCACCGGGA AGTCCACGCT CGCCGGCGGG CTCGCCGGCA CGGAGCGGTG GACCGTGCTC
CGCTTCGACG ACGCCGCGGC GGACCTGGCG GCCTCGGCCA ACCGTCACGA TCTCGCGGCG
GGGGGATGGG CAGATGCAGG GGGATGGGTA CCGGCCGACG ACGTCGACGC GGTCCACCAG
GAACTGCTGC GCCAGGCCGG CACAGCGCTG CGCCGCGGCG AGTCCGTCGT GGTCGACGCA
CCGTGGAACC GGCACAGCCA GCGCGCGCAA GCGGCCGATG TCGCTCGCCG TGCCTTCGCG
GACCTGGTGC AACTGCGCTG CACGGCCCCG CCCGATCTCG CGGCAACCCG TACCGACCGG
CGTTCCCCGG CAACCACCGC GGCAACCAGC GCCACAGGGT CCGTCGGCCT TGGCCGTCTC
GCCGACACCG TCTCCCGGAT CGAACCCTGG CCGGAAGCCA AGATCATCGA TACGGCGGTG
GCCATCGCCG AGTCGCTGCA CAACGCCCGC CGCGCCGCGG CCTGA
|
|---|
| Protein sequence | MHDPSMLPRP PGRGQARAMS LETTVNPLPA ERGASASAPA VAPTVASGPP ARVVETARSV
LVFLGDRVFK VKKPVDLGAV DFRGRQARLA ACEAEVRLNR RLAPDVYLGV ADVIGPDGEP
CDHMVVMRRL PEARRLSTLA EGGTEVRAEI HALTRVLVDF HARCETSSRI AEAGGLDRLR
GRWDACFARV QRDHGAAVSA SILDHVNRLA VRYLDGRDEL LRERREAGRI RDGHGDLSAA
DIFCLDDGPR VLDCLEFEPG LRAADVLADA CALAADLEWL GRRDLARLFL DHYREMAGET
HPRSLEDFYW ALAALGRCQA ACQRVAAGEN AAAEARAFAD LALARLRWGR VRLVLVGGQR
GTGKSTLAGG LAGTERWTVL RFDDAAADLA ASANRHDLAA GGWADAGGWV PADDVDAVHQ
ELLRQAGTAL RRGESVVVDA PWNRHSQRAQ AADVARRAFA DLVQLRCTAP PDLAATRTDR
RSPATTAATS ATGSVGLGRL ADTVSRIEPW PEAKIIDTAV AIAESLHNAR RAAA
|
|---|
| |