Gene Francci3_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3246 
Symbol 
ID3904417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3843204 
End bp3844751 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content76% 
IMG OID637880571 
ProductFAD dependent oxidoreductase 
Protein accessionYP_482332 
Protein GI86741932 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.396208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG ACAGCTTCGA CGCGGTGATC GTCGGGGCCG GTCCAAACGG GCTGACCGCC 
GCCCTGACGC TGGCCGAGGC CGGCTGGCGG GTACTCGTCC GGGAGGCCGC GGGCACTCCC
GGTGGTGGGC TGCGAACAGA AGAGCTGACG CTGTCCGGCT TCCGGCACGA CGTGTGCGCA
ACCGTCCTGC CGCTCGCGCT CGCCTCCCCC GCACTGCGCG CCTTCGGCAC AGGCCCGACG
TCCTCCGCGA ACCCGACGTC CTCCGCGAAC CCGGCGTCCT ACGCGGACCC GACCCCCACC
GCAGGCCCGA CCCCGACCGA GGGGCTTCGG TGGGCGCATC CGCCGGTGCC GCTCGCCCAC
CCGCTCGACG ACGGCCCGGC GGCGCTGCTG CGCCGCGACC TCGACGCCAC CGCGGCGGGC
CTCGCCGACC GGGACGGCGT CGATTCCGGC TGGCGCCGGC TGGTCGGCCC GCTGGCGTCC
GACGGCTCGC GGCTGGCCGA GGGCGTGCTG GCACCGTTCG ACCTGCCGCC CGCCGCGCCC
CTGACCCTCG CCCGGTTCGG CGTGCGCGGG CTGTGGTCCG CGACCGCGCT CGCCCGCGCC
GCGCTGCGCG GTGAGGCGGC GCGAGCGCTG TTCGCCGGGC TCGCCGCCCA TTCCATGATC
GATTTACATC GCCCGGTCAC CGCAGGCTAC GGGCTGTTCC TCGGGGTGCT CGCGCACCAG
GTCGGCTGGC CGGTAGCCGT CGGTGGATCA TCATCACTGG CGGAGGCCCT GGTCGCCCGG
CTGCGCGAAC TCGGCGGCGA ACTGGTCACC GGCGCCCCGG TGACCAGCCT GTCGGAACTG
CCGCCCGCGC GGGCCGTGCT GCTCGATCTC ACCCCTCGCC AGGTGCTCGC GGTCGCCGAC
GCCGCGCTGC CCGGCCGCTA CCGCGCCGCG CTCGGCCGAT ACCGGTACGG ACCGGGAGTT
TTCAAGATTG ACTGGGCGCT CGACGGACCG GTGCCCTGGC GCGATCCGGC GGTCGCCGGG
GCGGCGACCG TGCACCTGGG CGGCACGCTC GCCGAGATCG CCGCGGCCGA GCGGGCCGTC
GCCCGCGGCC ACCATCCAGA CCGGCCGTTC GTACTGTTCG TTCAGGCGTG CGCCGCCGAC
CCGAGCCGCG CCCCGGCCGG CCGGCACACC GGGTGGGCCT ACTGCCATGT CCCACTGGGC
TCCAGCGTCG ACATGACCGA CGCGCTCGAG TCCCAGGTCG AACGCTTCGC CCCCGGATTC
CGCGACCGGG TGCTCGCCCG CCACGTGATG GGACCGACGG CGCTGGAGGC GCACAACGCC
AACGAGATCG GCGGCGACAT CGGCGGTGGC ACCGCCGACC TGCGCCAGTT GGTCGCCCGG
CCGGTGCTCT CGCCACGCCC CTGGGCGACG CCGCTGCCCG GCGTCTACCT GTGTTCCGCC
GCCACCCCTC CCGGCGCCGG GGTACACGGC ATGGCCGGGC TGCACGCGGC GACCCTCGCC
CTCAGCCGGG AGCGGCGAGC GGCCTGGCCC GTAGGTCGGC CGGGATGA
 
Protein sequence
MSTDSFDAVI VGAGPNGLTA ALTLAEAGWR VLVREAAGTP GGGLRTEELT LSGFRHDVCA 
TVLPLALASP ALRAFGTGPT SSANPTSSAN PASYADPTPT AGPTPTEGLR WAHPPVPLAH
PLDDGPAALL RRDLDATAAG LADRDGVDSG WRRLVGPLAS DGSRLAEGVL APFDLPPAAP
LTLARFGVRG LWSATALARA ALRGEAARAL FAGLAAHSMI DLHRPVTAGY GLFLGVLAHQ
VGWPVAVGGS SSLAEALVAR LRELGGELVT GAPVTSLSEL PPARAVLLDL TPRQVLAVAD
AALPGRYRAA LGRYRYGPGV FKIDWALDGP VPWRDPAVAG AATVHLGGTL AEIAAAERAV
ARGHHPDRPF VLFVQACAAD PSRAPAGRHT GWAYCHVPLG SSVDMTDALE SQVERFAPGF
RDRVLARHVM GPTALEAHNA NEIGGDIGGG TADLRQLVAR PVLSPRPWAT PLPGVYLCSA
ATPPGAGVHG MAGLHAATLA LSRERRAAWP VGRPG