Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3246 |
Symbol | |
ID | 3904417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3843204 |
End bp | 3844751 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637880571 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_482332 |
Protein GI | 86741932 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.396208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGG ACAGCTTCGA CGCGGTGATC GTCGGGGCCG GTCCAAACGG GCTGACCGCC GCCCTGACGC TGGCCGAGGC CGGCTGGCGG GTACTCGTCC GGGAGGCCGC GGGCACTCCC GGTGGTGGGC TGCGAACAGA AGAGCTGACG CTGTCCGGCT TCCGGCACGA CGTGTGCGCA ACCGTCCTGC CGCTCGCGCT CGCCTCCCCC GCACTGCGCG CCTTCGGCAC AGGCCCGACG TCCTCCGCGA ACCCGACGTC CTCCGCGAAC CCGGCGTCCT ACGCGGACCC GACCCCCACC GCAGGCCCGA CCCCGACCGA GGGGCTTCGG TGGGCGCATC CGCCGGTGCC GCTCGCCCAC CCGCTCGACG ACGGCCCGGC GGCGCTGCTG CGCCGCGACC TCGACGCCAC CGCGGCGGGC CTCGCCGACC GGGACGGCGT CGATTCCGGC TGGCGCCGGC TGGTCGGCCC GCTGGCGTCC GACGGCTCGC GGCTGGCCGA GGGCGTGCTG GCACCGTTCG ACCTGCCGCC CGCCGCGCCC CTGACCCTCG CCCGGTTCGG CGTGCGCGGG CTGTGGTCCG CGACCGCGCT CGCCCGCGCC GCGCTGCGCG GTGAGGCGGC GCGAGCGCTG TTCGCCGGGC TCGCCGCCCA TTCCATGATC GATTTACATC GCCCGGTCAC CGCAGGCTAC GGGCTGTTCC TCGGGGTGCT CGCGCACCAG GTCGGCTGGC CGGTAGCCGT CGGTGGATCA TCATCACTGG CGGAGGCCCT GGTCGCCCGG CTGCGCGAAC TCGGCGGCGA ACTGGTCACC GGCGCCCCGG TGACCAGCCT GTCGGAACTG CCGCCCGCGC GGGCCGTGCT GCTCGATCTC ACCCCTCGCC AGGTGCTCGC GGTCGCCGAC GCCGCGCTGC CCGGCCGCTA CCGCGCCGCG CTCGGCCGAT ACCGGTACGG ACCGGGAGTT TTCAAGATTG ACTGGGCGCT CGACGGACCG GTGCCCTGGC GCGATCCGGC GGTCGCCGGG GCGGCGACCG TGCACCTGGG CGGCACGCTC GCCGAGATCG CCGCGGCCGA GCGGGCCGTC GCCCGCGGCC ACCATCCAGA CCGGCCGTTC GTACTGTTCG TTCAGGCGTG CGCCGCCGAC CCGAGCCGCG CCCCGGCCGG CCGGCACACC GGGTGGGCCT ACTGCCATGT CCCACTGGGC TCCAGCGTCG ACATGACCGA CGCGCTCGAG TCCCAGGTCG AACGCTTCGC CCCCGGATTC CGCGACCGGG TGCTCGCCCG CCACGTGATG GGACCGACGG CGCTGGAGGC GCACAACGCC AACGAGATCG GCGGCGACAT CGGCGGTGGC ACCGCCGACC TGCGCCAGTT GGTCGCCCGG CCGGTGCTCT CGCCACGCCC CTGGGCGACG CCGCTGCCCG GCGTCTACCT GTGTTCCGCC GCCACCCCTC CCGGCGCCGG GGTACACGGC ATGGCCGGGC TGCACGCGGC GACCCTCGCC CTCAGCCGGG AGCGGCGAGC GGCCTGGCCC GTAGGTCGGC CGGGATGA
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Protein sequence | MSTDSFDAVI VGAGPNGLTA ALTLAEAGWR VLVREAAGTP GGGLRTEELT LSGFRHDVCA TVLPLALASP ALRAFGTGPT SSANPTSSAN PASYADPTPT AGPTPTEGLR WAHPPVPLAH PLDDGPAALL RRDLDATAAG LADRDGVDSG WRRLVGPLAS DGSRLAEGVL APFDLPPAAP LTLARFGVRG LWSATALARA ALRGEAARAL FAGLAAHSMI DLHRPVTAGY GLFLGVLAHQ VGWPVAVGGS SSLAEALVAR LRELGGELVT GAPVTSLSEL PPARAVLLDL TPRQVLAVAD AALPGRYRAA LGRYRYGPGV FKIDWALDGP VPWRDPAVAG AATVHLGGTL AEIAAAERAV ARGHHPDRPF VLFVQACAAD PSRAPAGRHT GWAYCHVPLG SSVDMTDALE SQVERFAPGF RDRVLARHVM GPTALEAHNA NEIGGDIGGG TADLRQLVAR PVLSPRPWAT PLPGVYLCSA ATPPGAGVHG MAGLHAATLA LSRERRAAWP VGRPG
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