Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3240 |
Symbol | |
ID | 3904411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3834868 |
End bp | 3836142 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880565 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_482326 |
Protein GI | 86741926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.261485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTCC TGGAGGCTGC CGGACCTGGT GCCGAGAGAC GGGAGACCCG GATGCTGTTC GTCGGTGACG ACTGGGCGCA GGACCACCAC GATGTGGAGG TGCAGGACGA GACGGGTCGG CGACTGGCGA AGGGCCGGCT GCCGGAGGGC GTGGCCGGGA TCGCCCGGCT GCACGCGCTG ATCGGGCGGC ACCTGGCCGA GGACGCCGGC CCGGAGCAGG TCGTGGTCGG GATCGAGACC GACCGCGGCC CGTGGGTGCG GGCGCTCGTC GCGGCGGGCT ACCAGGTGAT CGCGGTGAAC CCGTTGCAGG CGGCGCGGTA CCGGGAGCGG TACTCGACGT CGGGTGCCAA GAGCGACGCC GGCGACGCGC ACAGCCTGGC GGACATGGTC CGTACGGACC GTCACCAGCT GCGGCCGGTC GCTGGGGACA GTGACACCGC CGAGGCGGTG AAGATCGTGG CGCGGGCGCA TCAGAACCTG ATCTGGGACC GGACCCGCCA GACCCAGCGG CTGCGCTCGG CGCTCCTGGA GTTCTTCCCG GCCGCGCTGG CCGCGTTCGA CGACCTCGAT ACCCCTGACG CGCTGGAGCT TCTCGCGAAG GCGCCGTCGC CGGCCGAGGC CGCGAGGCTG ACCGTTGCGC AGATCAGCGC CGCGCTCAGG CACGCCCGCC GGCGGAAGAT CCCCGAGAGG GCGGCCGCGA TCCGGGCGGC GCTGCGGGCC GAGCAGCTGC CCGTCACGCC GGCGGCGACC ACCGCCTACG CCGCGGTCGT GCGCGCCCAG GCCGGGCTGC TCGCAGCCCT CAACGGCGAG ATCGCCCGGC TCGAGGAGCA GGTCGCGGAC CATTTTGACC AGCACCCGGA CGCGAAGATC CTGCTGTCCC AGCCCGGCCT GGGACCGGTC CTCGCGGCCC GGGTGCTCGC CGAGTTCGGT GACGACCCGA CGCGCTACGC CGACGCGAAG GCACGGAAGA ACTACGCCGG CACGAGCCCG ATCACCCGCG CCTCCGGGAA GAAGAAGACG GTCCTGGCCC GCTACGCACG CAACAACCGG CTCGCCGACG CGCTACATCA GCAGGCGCTC TCGGCCCTGA GCGCATCCCC GGGCGCCCGG TCGTACTACG ACGCGATCCG CGCGCGCGGC ACGTCGCACC ACGCCGCGCT GCGCCAGCTC GGCAACCGGC TCGTCGGAAT CCTGCACGGC TGCCTCAAGA CCCACACCCC CTACAGTGAG GCAACCGCAT GGACACAGAA AGCAACACTC GACGTCGCCG CTTGA
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Protein sequence | MDLLEAAGPG AERRETRMLF VGDDWAQDHH DVEVQDETGR RLAKGRLPEG VAGIARLHAL IGRHLAEDAG PEQVVVGIET DRGPWVRALV AAGYQVIAVN PLQAARYRER YSTSGAKSDA GDAHSLADMV RTDRHQLRPV AGDSDTAEAV KIVARAHQNL IWDRTRQTQR LRSALLEFFP AALAAFDDLD TPDALELLAK APSPAEAARL TVAQISAALR HARRRKIPER AAAIRAALRA EQLPVTPAAT TAYAAVVRAQ AGLLAALNGE IARLEEQVAD HFDQHPDAKI LLSQPGLGPV LAARVLAEFG DDPTRYADAK ARKNYAGTSP ITRASGKKKT VLARYARNNR LADALHQQAL SALSASPGAR SYYDAIRARG TSHHAALRQL GNRLVGILHG CLKTHTPYSE ATAWTQKATL DVAA
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