Gene Francci3_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3237 
Symbol 
ID3904408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3832696 
End bp3833229 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID637880562 
ProductNUDIX hydrolase 
Protein accessionYP_482323 
Protein GI86741923 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.778002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.378798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCACG AACACCGGAC CCCGGTCGAC GTTCTTGCGC TACTGATACG GGACGGCCGC 
CTGCTCCTGA CGAAACGCGC GGGAGGCATC TACGGAAGCG GCTGCTGGGC GCTGCCCAGC
GGACGGATCG AGCCCGCCGA GGACGTCGTG ACCGCGGTGA TCCGGGAGCT CGACGAGGAG
CTCGGTATCG GGGTCGAACC CGAGGATGTC GCTTTCGCGG GTATCACGCA TGCCCTTCCG
CCGGACAGCG ACGCTCGTAT CGGTTTCGGC TTCCTGGTGT CGCGGTGGAG CGGCGAGCCC
ACCAATCGGG AGCCAGCCAC CTGCTCCGCC CTCGCCTGGC ACCCACCGGA CGATCTGCCG
GCCGACACCC TGGCGTACAG CAGGGAGATC ATCCGTCTGC ATCTGCGGGC GGAACCGTTC
TCCCGGTTCG GCTGGCCGCC GAGTCGGGGA GCGGGCGCAC GATCGCGGCA GGCTTTCTCG
GCTATCCGGT CCCGCGACCG GTCCACGGGT CCCCCGCCAG ACCGAGCTGG CTGA
 
Protein sequence
MRHEHRTPVD VLALLIRDGR LLLTKRAGGI YGSGCWALPS GRIEPAEDVV TAVIRELDEE 
LGIGVEPEDV AFAGITHALP PDSDARIGFG FLVSRWSGEP TNREPATCSA LAWHPPDDLP
ADTLAYSREI IRLHLRAEPF SRFGWPPSRG AGARSRQAFS AIRSRDRSTG PPPDRAG