Gene Francci3_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3233 
Symbol 
ID3904404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3827470 
End bp3828396 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID637880558 
Productmethyltransferase type 11 
Protein accessionYP_482319 
Protein GI86741919 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.863338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG CCGGTCTGGC GCTGCGCGCC GCCCGTCTCC TACTCACCCG CGCCGTTGCC 
GACACCACAC CTGATTACGA CATCGCCAGC AGCACCTATG ACGAGGCGTT CACCGCCCTC
ATGGGCCCGA ACTCGACGGC GATGCTGGAC CTGGTGGGGA TCGCCCCGGG GATGGACGTC
ATCGAGCTGG CATGCGGCAC GGGTCACCTG TCCGAACAGA TTCGGATCCG GCAGCAGGGC
CTCGGTTCGC TGCGGGTGAT CGAGAAGTCC CCGGGGATGC TGGCCGTCGC GAAGGCCAAG
ATGGAGACGC TCGGCCAAGC CTCCAAGGAT GTCAGCTGGC AGCAGGGCGA CATGCTGGAG
TTCCTCAAGG CCCAGGCGAC CAACAGCGCC GACGCGATCG TCTGCGGTTG GGCGATCTGC
TATAGCAAGC CCTCCCAATT GTTCCGCGAG GCGCGGCGGG TGCTCCGCCC AGGAGGTCGG
ATCGGCATCA TCGAGTCCCG CGCGGACGCA TTGGCCTCGC TGCGCAAGGC TTTCGAAGAC
GTCGTCGCGG ACGAGCCGAC TCTGCTCACC GCGATGGTGC GGGTGGCCCT GCCGAAGGAC
GCCGAGACGG TGGCCAGGTG GATGCGCAAG GGCGAACTGC GGGTAATCAA CCAGTATGAG
GGTGAACAGC GCTGGCCGGT GGCCACCGCC GAGGAAGCCG TAGAGTGGGT GGAACGGTCC
GGCGCCGGCG CCGGCTTCCG GGACTCGTTC GACATGTCCC GCGAAGACGA CGTCAGAGGC
AAACTGACAG AGGCGCTACG CAAGCAGGCC AGCCGGCCGG GGGGCCTCAC ACTCCTCCAT
CCGTTCGTCG TGGTCGTCGC CGAGACCACA CCGGAGCCGG CAGCTCCCGT CCAGCCGGGC
GTCACCAAGG CGAATGGGAT CCAGTGA
 
Protein sequence
MSRAGLALRA ARLLLTRAVA DTTPDYDIAS STYDEAFTAL MGPNSTAMLD LVGIAPGMDV 
IELACGTGHL SEQIRIRQQG LGSLRVIEKS PGMLAVAKAK METLGQASKD VSWQQGDMLE
FLKAQATNSA DAIVCGWAIC YSKPSQLFRE ARRVLRPGGR IGIIESRADA LASLRKAFED
VVADEPTLLT AMVRVALPKD AETVARWMRK GELRVINQYE GEQRWPVATA EEAVEWVERS
GAGAGFRDSF DMSREDDVRG KLTEALRKQA SRPGGLTLLH PFVVVVAETT PEPAAPVQPG
VTKANGIQ