| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3197 |
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| Symbol | |
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| ID | 3906163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3787935 |
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| End bp | 3788759 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880521 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_482283 |
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| Protein GI | 86741883 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.157433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG GCCGGAGGAG CTCCGGCGGG AGGAGCGCGG CCGCGCCCCG CTTCACCCCG
CCGCGGGGCC GGGCGCCGCT GGCGGTCGCG CTGGATGCCC CGGACGCCGC GACCGCGCTG
CGCTGGGCCG CCGCGGTCGC CCCCACCGTG GCCGTGCTGA AGATCGGTCT GGAGCTGTTC
TACCGGGAGG GCCCGGCAAT CGTGACGGCG CTGCGCGCGG CCGGCGTGCT CGCCGGGGCC
GGCGGCGCGG CGGTCGCCGC GGGCGGCACC GGGAGTGCCC CGGAGTTGTT CCTCGATCTC
AAACTGCACG ACATTCCCGC CACGGTCGCC GGGGGAATGC GCTCAATCAC CCCGTTGGGC
CCTCGTTTCG TGACCGTGCA TGCGGCTGGG GGGGCGGCGA TGATACGTGC GGCGATCGAG
GCGGCCCCGG ATGTCGAGGT AGCCGTCGTG ACCGTACTCA CCTCGCTGGA TGTGGCGGCG
CTCAGCGCGA TCGGGCTCGC CGGACCCCCT TCCGACGCCG TCCGCAGGCT CGCCGTGCTT
GCGGTCGAAG CCGGTGCGCG CACCCTGGTG TGCAGTCCGC GGGAGGTTCG AATGGTCCGT
ATGGAGCTTG GTAGCAATGT GACTCTCATC ACTCCAGGCG TGCGACCGGC GGGGTCGGAA
ACCGGCGATC AGGCCCGAAC CGCGACGCCG GAAGCTGCCC TTGTGGGGGG TTCTGACCTG
GTCGTGGTGG GTCGCCCGAT CACCGGTGCG CCCGACCCCG GGGTCGCCGC GAGGGCCATC
GCCGCAGGTC TCAGCGCTGC CGGCAGGGCT GCTGACCTGC TGTGA
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| Protein sequence | MSAGRRSSGG RSAAAPRFTP PRGRAPLAVA LDAPDAATAL RWAAAVAPTV AVLKIGLELF
YREGPAIVTA LRAAGVLAGA GGAAVAAGGT GSAPELFLDL KLHDIPATVA GGMRSITPLG
PRFVTVHAAG GAAMIRAAIE AAPDVEVAVV TVLTSLDVAA LSAIGLAGPP SDAVRRLAVL
AVEAGARTLV CSPREVRMVR MELGSNVTLI TPGVRPAGSE TGDQARTATP EAALVGGSDL
VVVGRPITGA PDPGVAARAI AAGLSAAGRA ADLL
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