Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3190 |
Symbol | fmt |
ID | 3903916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3779811 |
End bp | 3780824 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637880514 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_482276 |
Protein GI | 86741876 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000305844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.338989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTG TTTTCGCCGG TACCCCGGCG GTGGCTCTGC CCAGCCTGCG GGCGTTGATC GACAGCCCGC GCCATGACGT GGTCGCGGTT GTCACCCGGC CCGATCGGCC CTCCGGGCGG GGGCGGAAGG TGAAGCCGCC CCCCGTCCAC GTCCTGGCCG ACGAGGCCGG CATCCCGGTG CTCAGCCCGG ACCGGCCCCG GGACCCGGAG TTCCTGGCCA CGCTCGCTGG CCTCGCGCCC GACTGCTGCC CGGTGGTGGC CTACGGCGCG TTGCTACCGC CCGCGGCGCT CGCCATTCCC CGCCACGGTT GGGTGAACCT GCACTTCTCC CTGCTGCCGG CCTACCGCGG GGCGGCTCCG GTGCAGCGCA CCCTGCTCGC CGGGGACGAC CTGACCGGCG CGAGCGTCTT CCAGATCGAA CCGGCGATGG ACTCCGGTCC GGTCTACGGT GTCCTCACCG AGCGGGTTCG GCCGACGGAC ACCTCCGGTG ACCTGCTGGA CCGGCTCGCC GAGGCCGGCG CCGGGCTGCT GGTCGCGGTG ATGGACGGCA TCGCCGACGG GACGGTGCGG CCCGTGGCCC AGCCCGCCGA GGGGATCTCC TTCGCGCCGA AGCTGACCGC CGAGGAGGCC CGGATCGACT GGACGAAGCC GGCGATCGCG GTGGATCGGC TGGCGAGGGC CGCCACTCCC GCGCCGGGAG CCTGGACGAC GTTTCGCGAC CGGCGGCTCA AGATCGGTCC GGTGCGCCTC GGTGCGGTGT CCGGTCGGCC GGCCGGGCCG GTAGCGCTGC CCGCCGGGCT GCCGGCGGGG GGGCTGCCGG CGGGGCAGAT CATGGTGCTC CCCGGCGGGG ACGTGGCGGT CGGCACGGGC ACGAGCCCGG TGCTCCTCGG TGAGGTGCGT CCCGAGGGGC GAGGCCCGAT GGCGGCCGCG GCCTGGGCCC GCGGGGTCCG GATCGCCAAG GGGGAGACCC TCGGCGCGAT CGGCGCGATG CCGGTCAGTG GAGGAACGTC GTGA
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Protein sequence | MRLVFAGTPA VALPSLRALI DSPRHDVVAV VTRPDRPSGR GRKVKPPPVH VLADEAGIPV LSPDRPRDPE FLATLAGLAP DCCPVVAYGA LLPPAALAIP RHGWVNLHFS LLPAYRGAAP VQRTLLAGDD LTGASVFQIE PAMDSGPVYG VLTERVRPTD TSGDLLDRLA EAGAGLLVAV MDGIADGTVR PVAQPAEGIS FAPKLTAEEA RIDWTKPAIA VDRLARAATP APGAWTTFRD RRLKIGPVRL GAVSGRPAGP VALPAGLPAG GLPAGQIMVL PGGDVAVGTG TSPVLLGEVR PEGRGPMAAA AWARGVRIAK GETLGAIGAM PVSGGTS
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