| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3189 |
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| Symbol | |
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| ID | 3903915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3778339 |
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| End bp | 3779814 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637880513 |
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| Product | putative RNA-binding Sun protein |
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| Protein accession | YP_482275 |
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| Protein GI | 86741875 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000532749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.349925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGATCGG CCGGTTCGCC GGGCACCCGT GGGCCCCGGC CAGCGTCAAG CGTCGACCGG
CCGCGGTTGC TGGCCTGGGA GGTGCTGCGG GCGGTGGACG AGCGCGGCTC CTACGCCAAC
CTGCTGCTGC CGTCCCTGTT GGCGGGCAGC GGGCTGTCCG CCCGGGACCG CGGGTTCGTC
ACGGAGCTCG CCTACGGCTC CCTGCGTGCG CAGGGCACCC TCGACGGGGT GCTCGACACG
GCGACGAGTC GACCCGTCCA CACCATCGAC CCGCCGGTGC GCGACGCGCT GCGCCTGGGC
GCCTACCAGC TGCTGCGGAC CAGGGTCCCG GCCCACGCGG CCGTGGCCAG CACCGTCGAG
CTGGTCCGCA CGACGAGTGG CGAGCGCCCG GTCCGCTTCG CGAACGCCGT GCTGCGTCGG
GTGGCCGCCC GGGTGGCCGA GACCGGCGGC GATCTCGCCA CGATGCTGTC CGCACCGCGG
TTCGACGTCG ACCCTGTCGG TCACCTGGCG GTCGTGACGA CGCATCCCCG CTGGATCGTC
GAGGTCGTCG CGGAGGCCCT GGCCGGCGAC CTCACGGCGA CCCGCGCCGC GCTGGAGGCA
GACGACGTCC GACCCGCGGT ACACCTGGTC GCCCGTCCGG GCCGGGTCGA CCGTGACCGG
CTGCTCGCCG AGGCCGCGCA GGCAGGTCTG ACCGCCCGAG TCGGCCCCTA CTCGCCGTAT
GCGGTACGCC TCGACGGCGG GGACCCGGCG GGGTTGCCCG CCGTGGCCGC GGGCGCGGCC
GCCGTGCAGG ACGAGGGCAG CCAGCTCGTC ACCCTGGCCC TGGCCCGCGC GGCGACGGTG
GGCCGTGACC TCGGGCTGAC CGTCGACCTG TGCGCGGGCC CCGGCGGGAA GGCGGCCCTG
CTCGCCGCGC TGCTCGGCGG CTCCGCCCCA TCGGACGGGC CGGGTCTGCC GGACAGGCCG
GGTCCACCGG ACAGGCCGGC CCTGATCGCG GTCGAGCCCC GGGCGACCCG GGCGGCCATG
GTGGCCCGGT CCCTGGGCGA CGCGGCGCGG GCCTGGACGG TGCGCGCCGA CGGCCGGGCG
GTGCCGCTGC GGCCCGATGG AGCCGACCGG GTGCTGGTCG ACGTCCCCTG CACCGGCCTC
GGAGCACTGC GGCGCCGGCC GGAGGCCCGG TGGCGGCGGA CCTCGGCCGA TGTGGCCGCG
CTCGTCCCGC TCCAGCGTGC GCTGCTCGTC GCCGCGCTCG ACCTGGTCCG CCCGGGCGGG
GTGGTGGCGT ACGCGACCTG TTCCCCGCAC CCGGCCGAGA CCGTCGAGGT GGTGCGTGGC
GTGGCCGGAC AACGCGCCGA CACCTCCATC CTCGATGCCC GCCTGACCCT GCCGGAGGTC
GACCGGCTCG GTGACGGCCC GTTCGTCCAG CTCTGGCCGC ATCTCCATGG CACGGATGCG
ATGTTCGTCG CCCTGCTGCG CCGGGTCGAC AGCTGA
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| Protein sequence | MRSAGSPGTR GPRPASSVDR PRLLAWEVLR AVDERGSYAN LLLPSLLAGS GLSARDRGFV
TELAYGSLRA QGTLDGVLDT ATSRPVHTID PPVRDALRLG AYQLLRTRVP AHAAVASTVE
LVRTTSGERP VRFANAVLRR VAARVAETGG DLATMLSAPR FDVDPVGHLA VVTTHPRWIV
EVVAEALAGD LTATRAALEA DDVRPAVHLV ARPGRVDRDR LLAEAAQAGL TARVGPYSPY
AVRLDGGDPA GLPAVAAGAA AVQDEGSQLV TLALARAATV GRDLGLTVDL CAGPGGKAAL
LAALLGGSAP SDGPGLPDRP GPPDRPALIA VEPRATRAAM VARSLGDAAR AWTVRADGRA
VPLRPDGADR VLVDVPCTGL GALRRRPEAR WRRTSADVAA LVPLQRALLV AALDLVRPGG
VVAYATCSPH PAETVEVVRG VAGQRADTSI LDARLTLPEV DRLGDGPFVQ LWPHLHGTDA
MFVALLRRVD S
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