Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3187 |
Symbol | |
ID | 3903912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3776552 |
End bp | 3777268 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880511 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_482273 |
Protein GI | 86741873 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00151033 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.190561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACCG GCATCGTTGA AGAACTTGGC GTGGTGACCG CGGTGGATGC GCGGTCGGAG TCGGCGGCAC TCACCATCGC CTGTCAGACG GTTCTGGGTG ATGTGAGTCA CGGCGCGTCC ATCGCCGTCA ACGGTGTCTG TCTCACGGTG ACTTCCTTCG CCCGCCCGGG GCTCGACGGG GGCGCCGAGA CCGGTACGGC CGGCGGCCCA CCCGGCCCAC CCGGCCCACC CGGCACAACG GACGGCCCGT CGGCGTTCAC TGCTGACGTG ATGCGAGAGA CGCTGGTGCG TTCCTCTCTT GGGAAGCTCG CCGTCGGTGA CCGGGTGAAT CTCGAACGTC CCGTCCGGCT GGCGGACCGG CTGGGAGGCC ACCTGGTCCA GGGGCACGTC GACGGCGTCG GCACGGTCCT CGACCGGCAG CCCGGTGAGG GCTGGGAGTT CGTGCGCGTC GCGCTCCCCG AGGGGCTCGA CCGCTACCTC GTGGCGAAGG GCTCGGTGAC GGTGGACGGG GTGAGCCTGA CCGTCGTCGA CATCTCGCCG GCCGGTGGCG ACTCACCGGC CACCTTCACG GTCAGCCTGA TCCCCACCAC GCTCGAACTG ACCACGCTGG GTCGCCGTGC GCCGGGTTCC CTGGTCAACA TCGAGGTCGA CGTGCTGGCC AAGTACGTCG AGAAGCTGCA TGCCGGCCCC ATCGAACCGA ACGGACGACA CCGATGA
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Protein sequence | MFTGIVEELG VVTAVDARSE SAALTIACQT VLGDVSHGAS IAVNGVCLTV TSFARPGLDG GAETGTAGGP PGPPGPPGTT DGPSAFTADV MRETLVRSSL GKLAVGDRVN LERPVRLADR LGGHLVQGHV DGVGTVLDRQ PGEGWEFVRV ALPEGLDRYL VAKGSVTVDG VSLTVVDISP AGGDSPATFT VSLIPTTLEL TTLGRRAPGS LVNIEVDVLA KYVEKLHAGP IEPNGRHR
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