| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3186 |
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| Symbol | |
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| ID | 3903911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3775035 |
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| End bp | 3776555 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880510 |
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| Product | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein |
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| Protein accession | YP_482272 |
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| Protein GI | 86741872 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000678178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.119885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT CCGCGGCCGG CGCCTCCTCG ACGGCCACCC TTCCCGCCGG TGCCCTTCCC
GCCGGCTACG CCGACGTGCG GTTCGCCGCC ATCGAGGACG CGCTCGCCGA GATCGCCGCC
GGCCGCCCGC TCGTCGTCGT CGACGACGCC GACCGGGAGA ACGAGGGTGA TCTGATCTTC
GCGGCGGAGG CCGCGACACC CGAGCTGGTC GCGTTCATGA CGCGGTACAC CTCCGGTGTG
ATCTGCGTGC CGATGGACGC CGCCGACACC GACCGGCTCG AACTGGACCA GATGGTCCCG
CACAACACGG AGCGGATGGG CACCGCGTTC ACCATCACCG TGGACGCCCG CGACGGCGTC
TCCACCGGGA TCTCCGCCGC CGACCGGGCC CGCACCATCC GGTTGCTGGC CGACCCGCGG
ACCACGCCCG GCGACCTGAG CCGGCCGGGC CACATCTTCC CGCTGCGGGC CAAGGACGGC
GGGGTGCTGC GCCGCCCCGG CCACACCGAG GCCGCGGTCG ACCTGGCCCG GCTCGCCGGG
CTGCGGCCGG CCGGTGCGAT CTGCGAGATC GTGAACGACG ACGGGACGAT GGCCCGGCTT
CCCCGGCTCG CCGAGTTCGC CCGCGAGCAC GGGCTGCTGC TGATCTCCAT CGCCGATCTC
ATCGCTTACC GTCGGCGGAC CGAGAAGCAG GTGGTGCGGG TCGCGGAGGC GTCGCTTCCG
ACGCGTTACG GGGCGTTCCG GGCGGTCGGG TTCCGCAACA TCCTCGACGG CGTCGAACAC
ATCGCGCTGA TCCGCGGCGA GCTCGGTGAC GGCGCGGACG TGCTGGTCCG GGTGCACAGC
GAATGCCTCA CCGGGGACGT CTTCGGCTCC CGGCGCTGCG ACTGCGGAAC CCAGCTCGAC
GCGGCACTGC GCATAATCGC GACCGAGGGA CGCGGAGTGG TGCTCTACAT GCGGGGCCAC
GAGGGCCGGG GCATCGGCCT GATGCACAAG CTGCGGGCCT ACCAGCTGCA GGACGCCGGC
CACGACACCG TCGACGCCAA CCTCGCGCTG GGTCTGCCGG CCGACGCCCG TGACTACGGC
ACCGGGGCCC AGATCCTGGT CGACCTCGGC GTGCGCGGCA TCCGGCTGCT GTCCAACAAT
CCGACGAAGC GGGCCGGGCT GGAGGGCTAC GGCCTGCGCA TCGTCGAACT CATCGGGATG
CCGGTCACCC AGACGCCGGA GAACCTGCGC TACCTGACCA CCAAGCGGGA CCGGATGGGA
CACGTCATTC CCGGTCTGCC CAGCATTCCC GGTCTGCCCA GCATTCCCGG TCCGCCCGGC
CTTCCGGGTC CGCCCGGCCT TCCGGGTCCA CCCGGCCTGT CCGATCTGCC TAGGGCCGTG
GGCGAGGACG AGCCGGCCGG CTCGCGCTGG ATCCCGGGGG CGCCGAGGGC GCCGAGGGTA
CCCGTCACCT CCGGCTGCAC GGCCGTCGCG GGCCCGGGTA CGTCCGCCGG GGTCGACTGT
GCCGAGGGGG AGGGTCTGTG A
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| Protein sequence | MTTSAAGASS TATLPAGALP AGYADVRFAA IEDALAEIAA GRPLVVVDDA DRENEGDLIF
AAEAATPELV AFMTRYTSGV ICVPMDAADT DRLELDQMVP HNTERMGTAF TITVDARDGV
STGISAADRA RTIRLLADPR TTPGDLSRPG HIFPLRAKDG GVLRRPGHTE AAVDLARLAG
LRPAGAICEI VNDDGTMARL PRLAEFAREH GLLLISIADL IAYRRRTEKQ VVRVAEASLP
TRYGAFRAVG FRNILDGVEH IALIRGELGD GADVLVRVHS ECLTGDVFGS RRCDCGTQLD
AALRIIATEG RGVVLYMRGH EGRGIGLMHK LRAYQLQDAG HDTVDANLAL GLPADARDYG
TGAQILVDLG VRGIRLLSNN PTKRAGLEGY GLRIVELIGM PVTQTPENLR YLTTKRDRMG
HVIPGLPSIP GLPSIPGPPG LPGPPGLPGP PGLSDLPRAV GEDEPAGSRW IPGAPRAPRV
PVTSGCTAVA GPGTSAGVDC AEGEGL
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