Gene Francci3_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3180 
SymbolrplT 
ID3903905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3769614 
End bp3769994 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content70% 
IMG OID637880504 
Product50S ribosomal protein L20 
Protein accessionYP_482266 
Protein GI86741866 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0268094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.168846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG TGAAGCGGGC GGTCAACGCC CAGAAGAAGC GCCGTACGGT CCTCGAGCAG 
GCCAGCGGCT ACCGGGGCCA GCGCTCGCGG CTCTACCGCA AGGCCAAGGA GCAGATGCTC
CACTCGATGA CCTACTCCTA CCGGGACCGC CGCGCGCGCA AGGGCGACTT CCGGCAGCTG
TGGATCACTC GGATCAACGC GGCGGCGCGG GCGAACGGTC TGACCTACAA CCGCTTCGTG
CAGGGTCTGA AGCTGTCCGG CGTCGAAGTC GACCGCAAGA TCCTGGCCGA CCTCGCGGTC
AACGACGCGG TCGCGTTCAC CGCCCTGGTC GAGGTGGCAC GGGCCGCGCT GGCGGCGGCG
CCGGAGCCCA CCGCCGCCTG A
 
Protein sequence
MARVKRAVNA QKKRRTVLEQ ASGYRGQRSR LYRKAKEQML HSMTYSYRDR RARKGDFRQL 
WITRINAAAR ANGLTYNRFV QGLKLSGVEV DRKILADLAV NDAVAFTALV EVARAALAAA
PEPTAA