Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3180 |
Symbol | rplT |
ID | 3903905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3769614 |
End bp | 3769994 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637880504 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_482266 |
Protein GI | 86741866 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0268094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.168846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCG TGAAGCGGGC GGTCAACGCC CAGAAGAAGC GCCGTACGGT CCTCGAGCAG GCCAGCGGCT ACCGGGGCCA GCGCTCGCGG CTCTACCGCA AGGCCAAGGA GCAGATGCTC CACTCGATGA CCTACTCCTA CCGGGACCGC CGCGCGCGCA AGGGCGACTT CCGGCAGCTG TGGATCACTC GGATCAACGC GGCGGCGCGG GCGAACGGTC TGACCTACAA CCGCTTCGTG CAGGGTCTGA AGCTGTCCGG CGTCGAAGTC GACCGCAAGA TCCTGGCCGA CCTCGCGGTC AACGACGCGG TCGCGTTCAC CGCCCTGGTC GAGGTGGCAC GGGCCGCGCT GGCGGCGGCG CCGGAGCCCA CCGCCGCCTG A
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Protein sequence | MARVKRAVNA QKKRRTVLEQ ASGYRGQRSR LYRKAKEQML HSMTYSYRDR RARKGDFRQL WITRINAAAR ANGLTYNRFV QGLKLSGVEV DRKILADLAV NDAVAFTALV EVARAALAAA PEPTAA
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