| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3178 |
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| Symbol | |
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| ID | 3903903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3767555 |
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| End bp | 3768700 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880502 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_482264 |
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| Protein GI | 86741864 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0982529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.120585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTG TCACGTCGCC ATCCGGGCAG GTGCCGCCCT CCGGCCCCGG CTGCGCGCCC
GATGCCACCG ATTCAGCCGT GTCGGCCGCG CAGGACGGCC CACTGCCTGC CGCCGCCTTC
GACCTGCTAC CGGATTCGGT GATCGTGACC GACGCCGCCG GCGTCGTCGA GGTGTTCAAC
CGGGCGGCGG CGAAGCTCAC CGGGGTGGAT GGACCGTCCG CGATCGGCCG GCATCTGACC
GAGGTCCTCC CGTTGCTGGA CGAGCGGGGC AACGACTGGT GGGAGTGCTC TACAGCCAGC
CGGAACCTGC CGCGGGTCAC CGGGCAGCCG GAGCGGCGCC TGACCTACGC GGGTCCAGTC
CACGACCGTG ACTTCCACGT CACGGTGCGG TTCAACCGGG TCGCCGGTCG GCTGGTGCGG
GTGTCGCTGT CCCTGCGCGA CACCCTCAGC CGCGAGCGGC TGGAACGCAA CCGGGCGGAC
CTGGTCGCGA CCGTGGCGCA CGAGCTGCGC TCGCCGCTGA CCAGTGTGAA GGGATTCACC
GCGACGCTGC TCGCCAAGTG GGACCGGTTC ACCGACGAGC AGAAGAAGCT CATGCTGAAC
ACGGTCAACA CCGACGCCGA CCGGGTCACG CGCCTGCTCA CCGAGGTGCT GGACGTCTCT
CGGATCGACT CCGGACGCAT CCAGGTCCGC AAGCAGATCG TCGACCTGCC CGCCCGGGTG
CGTTCGGTGG TGGACGGCAA GGTGGCCTCG GGCGCGGCGG GCGCCGACCG GTTCTTCATC
CGCGAGGAGG GCGAACTGCC CGAGATGTGG GTCGATCCGG ACAAGATTGA ACAGGTACTG
CACAACCTCG TCGACAACGC CCTGCGGCAT GGTGCGGGTA CTGTGACGGT ACTGCTGCGT
GGCAGGGACA GCGGCACGGA GGTAAGCGTG GCCGACGAGG GTGAAGGCGT GTCCGAATCG
AACGCCGCGC GCGTGTTCAC GAAGTTCTGG CGGGGCGCCA GCCGCGGGAA CGGCACCGGC
CTCGGGCTCT ACATCGCCAA GGCGCTGATC GAGGCGCACG GCGGCACCAT CTCGGTCGGC
CGGGCCCCGG GTGGCGGCGC CGAGTTCCGA TTTTTCGTGC CCGCCGGTGG CCCGGTGTTC
GGCTGA
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| Protein sequence | MNIVTSPSGQ VPPSGPGCAP DATDSAVSAA QDGPLPAAAF DLLPDSVIVT DAAGVVEVFN
RAAAKLTGVD GPSAIGRHLT EVLPLLDERG NDWWECSTAS RNLPRVTGQP ERRLTYAGPV
HDRDFHVTVR FNRVAGRLVR VSLSLRDTLS RERLERNRAD LVATVAHELR SPLTSVKGFT
ATLLAKWDRF TDEQKKLMLN TVNTDADRVT RLLTEVLDVS RIDSGRIQVR KQIVDLPARV
RSVVDGKVAS GAAGADRFFI REEGELPEMW VDPDKIEQVL HNLVDNALRH GAGTVTVLLR
GRDSGTEVSV ADEGEGVSES NAARVFTKFW RGASRGNGTG LGLYIAKALI EAHGGTISVG
RAPGGGAEFR FFVPAGGPVF G
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