Gene Francci3_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3170 
Symbol 
ID3903895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3757213 
End bp3757917 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID637880494 
ProductArgR family transcriptional regulator 
Protein accessionYP_482256 
Protein GI86741856 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0388533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGG AAGCAGGCGC GGAGGCCGCG CGTGCCGCGC CGTTGACCAA GCACGCCCGC 
CAGGCTCGGC TGGCGGCGTT GATCGGTCAG CGCGGCGTGC GTTCACAGAC CGAGCTCGCG
CGTCTGCTGG CCGCCGAGGG CGTCCAGGTT ACCCAGGCAA CCCTGTCCCG TGATCTGGAG
GACATCGGGG CGACCAAGGT GCGCGGTCCG GACGGCGGCT TGGTCTACGC GGTCGAGGCG
AACCTCGCGC CGGCGGAGAT CGTCCGGTTG TCGCTCACCC GGCTCTGCGA GGAACTGCTG
GTCTCCGCGG AGGCCAACGG CGACCTGGTC GTGCTGCGCA CACCGTCGGG CGCCGCGCAG
CTGTTCGCCT CGGTGCTCGA CCGGGAGGCG CTTCCGGGGG TCATGGGCAC GATCGCGGGG
GATGACACGG TGCTCGTCGT CTGCCGGTCG GCTCCCGCAG CCGAGGCCCT GGTCCGTCCG
GAGAGCTCGG TCCGTCCGGA GAGCTCGGTC CGTCCGGAGA GCTCGGTCCG TCCGGAGAGC
TCGGTCCGTC CGGAGAGTTC GGTCGGTCCG GGAGATCCCG CTGGTCAGGG AGGGCATGCT
GGTCCGAGGG GTCCGGCACT CGCCGCTCAT CTCCTGTGGC TCGCCGACGG CCGGGCGCGG
GGAGCGTCGA CGGGATCGTC CGCCGTGCCA GACCAGGATG CGTAG
 
Protein sequence
MTSEAGAEAA RAAPLTKHAR QARLAALIGQ RGVRSQTELA RLLAAEGVQV TQATLSRDLE 
DIGATKVRGP DGGLVYAVEA NLAPAEIVRL SLTRLCEELL VSAEANGDLV VLRTPSGAAQ
LFASVLDREA LPGVMGTIAG DDTVLVVCRS APAAEALVRP ESSVRPESSV RPESSVRPES
SVRPESSVGP GDPAGQGGHA GPRGPALAAH LLWLADGRAR GASTGSSAVP DQDA