Gene Francci3_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3162 
Symbol 
ID3903884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3741465 
End bp3741803 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content72% 
IMG OID637880483 
Producthypothetical protein 
Protein accessionYP_482248 
Protein GI86741848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00846617 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA GGTCGCAGTG CGAGGCCGCG CTCCATGCTC TCGCCGCCCG CCTGGATGGG 
CTCTCCGCCG ACGGCCGTCC CCCGCGCGCC CCGGATCGCG TCATCGTCTG TCGTATCCCC
GATCTCGGCG CTGTCTTCTC CGGGGAGCTG CGCGACGGCT GCCTGCGGCA CATTGGCGAA
GGCAGCCGCG ACGACGCCCA GATCACCCTG ACGCTGGAGA GCGACGACCT GGTGGCGGTC
GCCGAGGGAA GGCTTCCCGC GATGACCGCC TGGGCCAGTG GGCGGCTGAA GGTGGACGCG
AGCGTGTGGG ATCTGCTGCG GGTCCGCTCG CTGCTGTGA
 
Protein sequence
MADRSQCEAA LHALAARLDG LSADGRPPRA PDRVIVCRIP DLGAVFSGEL RDGCLRHIGE 
GSRDDAQITL TLESDDLVAV AEGRLPAMTA WASGRLKVDA SVWDLLRVRS LL