| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3157 |
|---|
| Symbol | pyrG |
|---|
| ID | 3903954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3734979 |
|---|
| End bp | 3736805 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637880478 |
|---|
| Product | CTP synthetase |
|---|
| Protein accession | YP_482243 |
|---|
| Protein GI | 86741843 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
|---|
| TIGRFAM ID | [TIGR00337] CTP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0522365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCAGG CGCATATCAC CAAACACATC TTCGTCACCG GCGGGGTTGC GTCCAGTCTC
GGCAAGGGAC TGACCGCGTC GAGCCTTGGT CGACTACTCA AGGCTCGTGG ACTTCGTGTC
ACGATGCAGA AGCTCGACCC CTACCTCAAC GTGGACCCGG GAACGATGAA CCCGTTTCAG
CACGGTGAGG TGTTCGTGAC CGACGACGGG GCCGAGACCG ACCTCGACAT CGGCCACTAC
GAGCGGTTCC TCGACGTCAG CCTCGACGGC AGCGCCAACG TGACGACGGG TCAGGTCTAC
TCGGCCGTCA TCGCCAGGGA ACGCCGCGGC GGCTATCTGG GCCAGACCGT CCAGGTCGTC
CCGCACATCA CCGACGAAAT CAAGGACCGG ATCCGGCGGC TGGCCGATGA CTCCGTCGAC
GTGGTGATCA CTGAGGTCGG CGGGACCGTC GGGGACATCG AATCGCTGCC CTACCTGGAG
GCGATCCGTC AGGTACGCCA CGAGGTCGGT CGGGACAACG CCCTGACGGT GCACGTGAGC
CTGGTCCCCT ACCTCGCCCC CTCCGGAGAG TTGAAGACCA AGCCGACCCA GCATTCGGTC
GCGGCGTTGC GCAGCATCGG CCTGCAGCCC GACGCCGTGG TCTGCCGGTC CGACCGGCCG
CTGCCCGATT CGCTCAAGAA GAAGATCGCG ATGATGTGCG ACGTCGATGA CGAGGCCGTC
GTCGGGGCGC CGGACGCGAG TTCCATCTAC GACATCCCCC GGGTGCTGCA CCGCGAGGGC
CTCGACGCCT ACGTGGTGCG TCGGCTCGGG CTGTCCTTCC GCGACGTCGA CTGGACGGAG
TGGGACACGT TGCTGCGGCG GGTGCACCAC CCGGCCAACA CGGCGACGAT CGCGATCGTC
GGCAAGTACG TGGATCTCCC CGACGCCTAC CTCTCGGTGA CCGAGGCCCT GCGCGCCGGC
GCCTTCGCCA CCGACACCCG GGTGGACCTG CGGTGGGTCA CCTCGGACGA GTGCTCTTCC
CCGGATGCGA CGGCCACCCT GCTCGACGGG ATCGACGGGG TCATCGTTCC CGGTGGTTTC
GGGGTGCGGG GCATCGAGGG CAAGCTCACC GCGCTGCGGC ACGCCCGCGA GAACGGCATT
CCGACCCTCG GTATCTGCCT CGGCCTGCAG TGCATGGTCA TCGAGGCGGC CCGCAGTCTC
GCCGGCCTGG AGGCGGCGAA CTCCACCGAG TTCGTCCCCG AGACCCCCCA CCCGGTGATC
TCCACGATGG CCGACCAGCA CGAGGTGGTG GCCGGCACCC GGGACATGGG CGGCACGATG
AGACTGGGCC TGTACTCGTG CGTGCTGGCG CCCGGCACGC TCGCCCAGCG TGAATACGGC
GCCGCCGAGG TCGCCGAGCG CCACCGGCAC CGGTACGAGG TGAACAACGA CTATCGGCAC
CGGCTGGCCG CCGCCGGGCT GGTCTTCTCC GGGACGTCAC CGGACGGCCG CCTGGTCGAG
GTGGTCGAAC TGCCCGCCGA TGTGCATCCG TACTACGTCG GCACCCAGGC ACATCCGGAG
TTCCGGTCCC GGCCGACCCG GGCCCATCCG TTGTTCCGGG GTCTCGTCGC CGCGGCGGTC
GCGCATGCGG ACCGCCGCCG CGGGATGCTG CCGGTGGACC TGCCGAGCGA GGACGCCCCC
ACCCCGGAGA ACGGCGTCCC GGAGAACGGC GCCGCGCAGA CCCGCGGCGT CACGGCTGGT
CGATCCGGCG GGAGTATCCG CCGGGGCGCG AGCGCGTCCC GGCCGAGCGT CAGCTCCAAC
GGCACCGCCG CGCTGGTGTC CCCGTGA
|
|---|
| Protein sequence | MGQAHITKHI FVTGGVASSL GKGLTASSLG RLLKARGLRV TMQKLDPYLN VDPGTMNPFQ
HGEVFVTDDG AETDLDIGHY ERFLDVSLDG SANVTTGQVY SAVIARERRG GYLGQTVQVV
PHITDEIKDR IRRLADDSVD VVITEVGGTV GDIESLPYLE AIRQVRHEVG RDNALTVHVS
LVPYLAPSGE LKTKPTQHSV AALRSIGLQP DAVVCRSDRP LPDSLKKKIA MMCDVDDEAV
VGAPDASSIY DIPRVLHREG LDAYVVRRLG LSFRDVDWTE WDTLLRRVHH PANTATIAIV
GKYVDLPDAY LSVTEALRAG AFATDTRVDL RWVTSDECSS PDATATLLDG IDGVIVPGGF
GVRGIEGKLT ALRHARENGI PTLGICLGLQ CMVIEAARSL AGLEAANSTE FVPETPHPVI
STMADQHEVV AGTRDMGGTM RLGLYSCVLA PGTLAQREYG AAEVAERHRH RYEVNNDYRH
RLAAAGLVFS GTSPDGRLVE VVELPADVHP YYVGTQAHPE FRSRPTRAHP LFRGLVAAAV
AHADRRRGML PVDLPSEDAP TPENGVPENG AAQTRGVTAG RSGGSIRRGA SASRPSVSSN
GTAALVSP
|
|---|
| |