| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3145 |
|---|
| Symbol | |
|---|
| ID | 3903942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3721402 |
|---|
| End bp | 3722760 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637880466 |
|---|
| Product | L-glutamine synthetase |
|---|
| Protein accession | YP_482231 |
|---|
| Protein GI | 86741831 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.799755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC AGCAGGAGTT CGTTCTCCGG ACTCTGGAGG AGCGGGACAT CCGCTTCGTT
CGGCTCTGGT TCACCGACGT ACTCGGGTAC CTGAAGTCGG TGGAGATCGC CCCCGCGGAG
CTGGAGGGGG CGCTGGCGGA GGGTATCGGT TTCGACGGAT CCGCCATTGA GGGCTTTGCG
CGGGTACACG AGGCCGACAT GCTGGCCCGG CCCGACCCCT CCACCTTCCA GGTGCTTCCC
TGGCGCGGTG AACATCCGCT TACGGCCCGG ATGTTCTGCG ACCTCGTGAT GCCGGACGGC
ACGCCCGCCG CCGCCGACTC GCGCTGGGTG CTGCGGAGCG CGCTGGCCAG GGCGGCCGAC
GCGGGGTTCA CGTTCTACAC CCATCCGGAG ATCGAGTTCT TCCTGCTCAG GGAGCCGCCG
AAGCGGGGTG GCCCGGTGCC CCCGCCGGTG GACGAATCAG GCTACTTCGA CCTGACCCCC
AATGACATCA GCCATGATTT CCGGCAACAG GCCATCAGCA TGCTCGAACG GCTGGGCATC
TCGGTGGAGT TCAGCCACCA CGAGGTGGCC CCCGGCCAGC AGGAGATCGA TCTTCGCTAC
GCCGACGCCC TCACCATCGC CGACAACATC ATGACCTTCC GCCAGGTGGT CAGGGAGGTG
GCGTTGCGGC AGGGTATTTA CGCCACCTTC ATGCCCAAGC CGTTCGGTAA CCAGGCCGGG
TCGGGGATGC ACACCCATCT GAGCCTTTTC GAGGGCGACC GTAACGCCTT TCACGACCCG
ACCGACGACT ATCAGCTGTC CAAGGTGGCG AAGGCCTTCA TCGCCGGGCT CCTCGCGCAC
GCCGCCGAAA TCACCGCGGT GACCAACCAG TGGGTGAACT CCTACAAGCG GCTCATCGGC
GACCAGCGGG TCGGCGAGGT GCTGGAGGCG CCGGCCTATG TGTGCTGGGG CCACAACAAC
CGTTCGGCGC TCGTGCGGGT TCCGCTCTAC AAGCTCCACA AATCCAACGC CACCCGGGTG
GAGTTCCGGC TGCCGGACAG CGCGTGCAAC CCGTATCTCA CCTTCGCCCT GGTGCTGGCA
GCCGGCCTGC GGGGTGTCCA GGGCGGTTAT GAGCTGCCAC CGGCTTCGGC GGACGATGTC
TGGACGCTCA CCGACACGCA GCGCCGTGAG CGCGGGATCA CCGCCCTGCC CGGCTCGCTC
GCCGAGGCGG TCAAGGTGAT GGAGCATTCC GCGCTTGTGC GGGAGACCCT CGGCGACGAG
TTGTTCGACT TCTTCCTGCG GAACAAGCGG GCCGAGTGGC TGGAATACCG TCGGCAGGTG
ACCCCGTTCG AGATCGACCG GTACCTGCCG GTGCTATGA
|
|---|
| Protein sequence | MDKQQEFVLR TLEERDIRFV RLWFTDVLGY LKSVEIAPAE LEGALAEGIG FDGSAIEGFA
RVHEADMLAR PDPSTFQVLP WRGEHPLTAR MFCDLVMPDG TPAAADSRWV LRSALARAAD
AGFTFYTHPE IEFFLLREPP KRGGPVPPPV DESGYFDLTP NDISHDFRQQ AISMLERLGI
SVEFSHHEVA PGQQEIDLRY ADALTIADNI MTFRQVVREV ALRQGIYATF MPKPFGNQAG
SGMHTHLSLF EGDRNAFHDP TDDYQLSKVA KAFIAGLLAH AAEITAVTNQ WVNSYKRLIG
DQRVGEVLEA PAYVCWGHNN RSALVRVPLY KLHKSNATRV EFRLPDSACN PYLTFALVLA
AGLRGVQGGY ELPPASADDV WTLTDTQRRE RGITALPGSL AEAVKVMEHS ALVRETLGDE
LFDFFLRNKR AEWLEYRRQV TPFEIDRYLP VL
|
|---|
| |