Gene Francci3_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3142 
Symbol 
ID3903939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3714880 
End bp3716304 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID637880463 
ProductL-glutamine synthetase 
Protein accessionYP_482228 
Protein GI86741828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAA AAGCAGAAGA CGTGCTTCGC TATATCCGGG ACGAAGACGT TCAGTTCATC 
GATGTCAGGT TCTGCGATCT TCCCGGGATC ATGCAGCACT TCACCATCCC GACCCAGGTC
TTCGCGGAGT CGGTGTTCAC CGAAGGCCTG ATGTTCGACG GCTCGTCGAT CCGCGGCTTC
CAGGCCATCC ACGAGTCCGA CATGCTGCTG CTACCGGACC CGCACACCGC TTTCGTGGAC
CCCTTCCGCG AGCACAAGAC CCTCGCCATG ACGTTCTTCA TCCATGACCC GATCACCAAG
GAACAGTACT CCCGGGACCC GCGCAACATC GCCAAGAAGG CGGAGGCCTA TCTCCGGGGC
ACCGGCGTCG CGGACACCGC GTATTTCGGT CCGGAGGCGG AGTTCTACAT CTTCGACGAT
GTCCGTTATG ACTACAACCC CTACGGGTCG ATGCACCAGG TCGACTCGGT CGAGGCCGCC
TGGAACACCG CCCGGAAGGA AGAGGGCGGA AACCTCGGGT ACAAGCCGAG GTTCAAGGGC
GGCTACTTCC CGGTGCCGCC CACGGACCAC TTCACCGACC TGCGTTCCGA GATGACCCGG
GTGCTCTACG AGACGGGTAT CACCGTCGAG ATGCAGCACC ACGAGGTCGG CACCGCGGGC
CAGGCGGAGA TCGACATCAG GTACGACACG CTCCTGAAGA CCGCCGACAA CCTGATGCTC
TACAAGTACG TCATCCGCAA CGTCGCCCGC GGCCGCGGCA AGACCGTCAC CTTCATGCCG
AAGCCGCTGT TCGAGGACAA CGGATCCGGT ATGCACGTCC ACTCCAGCCT GTGGAAGGAC
GGGGAGCCAC TCTTCTACAG CCCGAACGGG TACGGCGGTC TCTCGGACAC CGCCCGCTAC
TACATCGGGG GGCTGCTGCA CCACGCCCCG GCGCTGCTGG CCTTCACCAA CCCCACCACG
AACTCCTACC GTCGGCTCGT GCCCGGCTAC GAGGCACCCG TCAACCTGGT CTACTCGGCC
CGCAACCGGT CAGCGTGCTG CCGCATCCCG CTCAGCGGTG ACTCGCCGAA GGCCAAGCGG
GTCGAGTTCC GCGTGCCGGA TCCGAGCTGC AACCCGTATC TCGCCTTCGC CGCGATTCTG
ATGGCGGGAC TCGACGGCGT GCGGAACAAG ATTGATCCGC CGGACCCGAT CGACAAGGAT
CTCTACGACC TCCCGCCGGA CGAGTTGGCC GCGGTTCCCC AGGTCCCGGG TTCGCTGGAG
AAGGTGCTCG ATGCGCTGGA GGCGGACAAC GAGTTCCTGC GGGAGGGCGA CGTCTTCACC
GCGGATCTGA TCGAGACCTG GCTGGACTAC AAGCGGGTCA ACGAGGTCGA CGCCATCCGC
CTGCGGCCGC ATCCATACGA GTTCACCCTC TACTACGACA TCTGA
 
Protein sequence
MFTKAEDVLR YIRDEDVQFI DVRFCDLPGI MQHFTIPTQV FAESVFTEGL MFDGSSIRGF 
QAIHESDMLL LPDPHTAFVD PFREHKTLAM TFFIHDPITK EQYSRDPRNI AKKAEAYLRG
TGVADTAYFG PEAEFYIFDD VRYDYNPYGS MHQVDSVEAA WNTARKEEGG NLGYKPRFKG
GYFPVPPTDH FTDLRSEMTR VLYETGITVE MQHHEVGTAG QAEIDIRYDT LLKTADNLML
YKYVIRNVAR GRGKTVTFMP KPLFEDNGSG MHVHSSLWKD GEPLFYSPNG YGGLSDTARY
YIGGLLHHAP ALLAFTNPTT NSYRRLVPGY EAPVNLVYSA RNRSACCRIP LSGDSPKAKR
VEFRVPDPSC NPYLAFAAIL MAGLDGVRNK IDPPDPIDKD LYDLPPDELA AVPQVPGSLE
KVLDALEADN EFLREGDVFT ADLIETWLDY KRVNEVDAIR LRPHPYEFTL YYDI