| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3135 |
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| Symbol | |
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| ID | 3903932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3707484 |
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| End bp | 3708947 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880456 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_482221 |
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| Protein GI | 86741821 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00928935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAT CTGTCACAAT GCCCCGGCTC GGGGAGAGTG TCTCCGAGGG AACCGTCACG
CGGTGGCTGA AGCAGGAGGG TGAACGCGTC GAGGCCGACG AGCCACTGCT CGAAGTCAGC
ACCGACAAGG TCGACACCGA GATCCCCGCC CCCGCCTCCG GTGTCGTCAG CTCGATCAAG
GTCGCCGAGG ATGAGACCGT CGAGGTCGGC GTCGAGCTCG CGGTGATCGA CGACGGGTCC
GCGGGTGGCG GCACCGCACC GGCGCAGGCC ACGCAGGCGC CCGCCGCGCC GGAGCCGGAA
CCCGAACCGG CGCCGGAACC CGTGAAGCCG GCTGCCGCGG CACCGCCGCC TCCGCCCACT
CCGACGCCCG CACCCGCGCC GACGCCCGCA CCCGCGCCGA CGCCCGCACC CGCGCCGACG
CCCGCGCCGG CACCGGCGTT CGCTCGTCAG CCGGAGCTCA CCCCGGTCCC GGCCCAGACC
CCGGCCGCCG CCAACGGGAA CGGCGGCGGC ATCGGTCGCT ACGTCACCCC GCTGGTGCGC
AAGATGGCCG CCGAGCTCGG CGTGGACCTG GGAACCGTGG CGGGAACCGG GCCGGGTGGA
CGCGTCACCA AGCAGGACAT CCAGGACGCC GCGCGGCCGC GGGACGCGGC TCCCGCGGCG
CAGGAGACTC CCGCGACCCC CCCCACAGCC CCGACAGCCC CAGCCGTGGC GCCGACCGTG
GCGCCGACCG GCGCTGCCCC CGTCCGCGGC CAGACCGAGA AGCTCTCCCG CCTGCGGGCG
TTGGTCGCTC GCCGCATGGT CGAGTCGCTG CAGATCAGCG CGCAGCTCAC CACCGTGGTG
GAGGCCGACG TCACCCGGAT CGCGCGGCTG CGGGACCGGG CGAAGAGCGG CTTCCAGGCT
CGGGAGGGCA TCAAGCTGTC ATTCCTGCCG TTCTTCGCCT TGGCGACCTG TGCGGCGCTG
CGTGAGTTCC CGCAGCTCAA CTCCAGCATC GACGTCGAGG CGGGCACGGT CACCTACCAC
GGAGAGGAGA ACCTCGGCAT CGCCGTGGAC TCCGAGCGTG GTCTGGTCGT GCCCGTCATC
CACAACGCCG GCGATCTCAA CCTCATCGGG CTGGCCCGCA AGATCGACGA CCTGGCGAGC
CGCACCCGGG CCAACCGAAT CTCGCCCGAC GAGCTCGGCG GCGGCACCTT CACCCTGACG
AACACCGGCA GTCGAGGCGC CCTGTTCGAC ACGCCGATCA TCAACCAGCC GCAGGTGGGC
ATCCTCGGCA CCGGCATCGT GACGAAGAAG CCGGCCGTCG TCGACGATCC GGAGCTGGGC
GAGATCATCG CGGTTCGTTC GACGGTGTAC CTGTCCCTCA CCTACGACCA CCGCATCGTC
GACGGTGCCG ACGCGGCTCG CTTCCTGGCC TTCACCAAGC ACCGGCTGGA AAACGGAGCC
TTCGAAGCCG AACTCGGCCT GTAG
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| Protein sequence | MSVSVTMPRL GESVSEGTVT RWLKQEGERV EADEPLLEVS TDKVDTEIPA PASGVVSSIK
VAEDETVEVG VELAVIDDGS AGGGTAPAQA TQAPAAPEPE PEPAPEPVKP AAAAPPPPPT
PTPAPAPTPA PAPTPAPAPT PAPAPAFARQ PELTPVPAQT PAAANGNGGG IGRYVTPLVR
KMAAELGVDL GTVAGTGPGG RVTKQDIQDA ARPRDAAPAA QETPATPPTA PTAPAVAPTV
APTGAAPVRG QTEKLSRLRA LVARRMVESL QISAQLTTVV EADVTRIARL RDRAKSGFQA
REGIKLSFLP FFALATCAAL REFPQLNSSI DVEAGTVTYH GEENLGIAVD SERGLVVPVI
HNAGDLNLIG LARKIDDLAS RTRANRISPD ELGGGTFTLT NTGSRGALFD TPIINQPQVG
ILGTGIVTKK PAVVDDPELG EIIAVRSTVY LSLTYDHRIV DGADAARFLA FTKHRLENGA
FEAELGL
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