| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3130 |
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| Symbol | cobT |
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| ID | 3903927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3700755 |
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| End bp | 3701927 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880451 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_482216 |
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| Protein GI | 86741816 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.609607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTGCC GACCGAGCGG ATCAGGTAGT AAGGATCCCG TGGATCCCGA TGCGTCAGGC
AGCGCCGTTC CCGCCGTTCC CCCGTTGGAC TCCGACGCGA TGGCGGCGGC TCGCCAGCGG
CAGACCGAAC TGACCAAGCC ACCCGGGGCG CTGGGCCGGC TCGAGGATCT GTCCATCTGG
CTCGCCGGCG CACAGGCGAC CTGCCCACCC CGTCCCTTCG CCCGGATCCG GGCGGTCGTG
ATCGCCGGCG ACCACGGTGT CGCCCAGGCC GGGGTGTCCG CCTTCCCCAG CGACGTGACC
GCCCAGATGG TCTCGAACTT CGCCGCGGGC GGCGCGGCGG TCAACGTGCT GGCCCGCCAG
GTCGGGGCCG CCGTGCGCGT GGTGGACGTG TCCGTGGACA CCGCGCGGCC CCTCACGCCG
GGCGGGGTGG ATGGATCGGC CGCACCGGAG CGCTATCGGG TGCGACGGTC GAGCGGACGG
ATCGACCGCA CCGACGCGCT GTCGGTCGCG GAGGCGGACG CCGCGTTCGC CGTCGGCCGA
CTCATCGCGG ACGAGGAGAT CGACGCGGGC GCGGACCTGC TTGTTCCCGG CGAGATGGGG
ATCGGCAACA CAACCCCCGC AGCCACCATC GTGGCGCTGC TGTGCGACCG GGAGCCGATC
GAGGTAGTCG GCCGCGGGAC GGGGATCGAC GACCAACGTT GGATGCTCAA GACGGCCGCG
ATCCGGGACG CGATGCGGCG CGGCCGGCCG TTCACCGGCG ACGCGCATTC GGTGCTGCGG
ATCGTCGGTG GAGCCGATCT GCTCGCCCTG GCCGGGCTGC TGGCGCAGTC CGCCGTGCGA
CGGACGCCGG TCATCCTCGA CGGTGTGATC GTCTGCGCGG CGGCACTGGC CGCAGAGCGG
ATCGCCCCAG GAGCAAGCCA GTGGTGGGTG GCCGGCACCC GGTCCACCGA GCCCGCCCAG
GGAATCGCAC TGGACGCACT CGGTCTGACC CCCCTGGTCG ACGCCGGCCT GCGTCTCGGG
GAGGGCACCG GTGCGCTCCT CGCCGTTCCG TTCCTGCGGG CGGCCCAGGC CACGCTGGCC
GAGATGGCGA CGTTCGACCA GGCCGGTGTC AGCGGGAAAG CCGAGGTCGG CGGCGGCCAA
GGGGACTCGG GCCCCGCGGC CGGTGCCCCG TGA
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| Protein sequence | MRCRPSGSGS KDPVDPDASG SAVPAVPPLD SDAMAAARQR QTELTKPPGA LGRLEDLSIW
LAGAQATCPP RPFARIRAVV IAGDHGVAQA GVSAFPSDVT AQMVSNFAAG GAAVNVLARQ
VGAAVRVVDV SVDTARPLTP GGVDGSAAPE RYRVRRSSGR IDRTDALSVA EADAAFAVGR
LIADEEIDAG ADLLVPGEMG IGNTTPAATI VALLCDREPI EVVGRGTGID DQRWMLKTAA
IRDAMRRGRP FTGDAHSVLR IVGGADLLAL AGLLAQSAVR RTPVILDGVI VCAAALAAER
IAPGASQWWV AGTRSTEPAQ GIALDALGLT PLVDAGLRLG EGTGALLAVP FLRAAQATLA
EMATFDQAGV SGKAEVGGGQ GDSGPAAGAP
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