Gene Francci3_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3124 
Symbol 
ID3903921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3695612 
End bp3696577 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID637880445 
Productaldo/keto reductase 
Protein accessionYP_482210 
Protein GI86741810 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.188754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.840561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATC GACGTCTTGG GCGCAGCGGC CTGTCGGTCA GTGAGATCTC CTACGGCAAC 
TGGATCACCC ATGGTGACCA GATCGAGGCG GACGCGGCGA CCGCCTGTGT GCGTGCCGCC
CTCGACGAGG GCATCACCAC ATTCGACACC GCGGACGTCT ACGCCGGTAC CCGCGCCGAG
AGCGTCCTGG GCGAAGCGCT GCAGGGCGTG CGCCGGGAGT CCTACGAGCT GTTCACCAAG
GTCTACTGGC CCACCGGCCC GGGGGAGAAC GACAAGGGCC TCGGTCGCAA GCACATCATC
GAGTCCGCGC ACGCCTCGCT GCGCCGTCTG CGCACCGACC ATCTCGACCT CTACCAGGCA
CACCGGTACG ACCCGACGGT GCCGATCGAA GAGACCCTGC GGGCCTTCGA CGACCTCGTC
CGCGCCGGCA AAGTGCTCTA CGTCGGCGTG TCCGAGTGGA GCGCCGCGCA GATCAGCGAC
GCCGTCCGGC TGGCCAGCGA GCTGGGGCTG GACCGCATCA TCTCCAACCA GCCGCAGTAC
TCGATGCTGT GGCGGACCAT CGAGGCCGAC ATCGTGCCCG TCAGCCGGAA GGCCGGGATC
TCCCAGATCG TCTGGTCGCC GATCGCCCAA GGCGTGCTCA CCGGCAAGTA CCCGCCCGGT
CAGCCACCGC CGGCCGGCAG CCGGGCCACC GGTGAAACCG GTTCCACCTT CATCTCCCGG
CTGCTGCGCG ACGACGTGCT GACCGCGGTG CAGGAGCTGC GGCCGATCGC CGCGGACGCC
GGGCTGTCGA TGGCGCAGCT CGCCGTCGCC TGGGTGCTGC AGAACGACAA CGTCGCCTCA
GCGATCATCG GCGCGTCCCG GCCGGAGCAG GTACGGGAGA ACGTCAAGGC TGCCGGCGTG
ACGCTCGACA CGGCGCTGCT TGATCGGATC GACGACGTGC TCGCCGAGGT CGTCACCCGG
GCCTGA
 
Protein sequence
MKHRRLGRSG LSVSEISYGN WITHGDQIEA DAATACVRAA LDEGITTFDT ADVYAGTRAE 
SVLGEALQGV RRESYELFTK VYWPTGPGEN DKGLGRKHII ESAHASLRRL RTDHLDLYQA
HRYDPTVPIE ETLRAFDDLV RAGKVLYVGV SEWSAAQISD AVRLASELGL DRIISNQPQY
SMLWRTIEAD IVPVSRKAGI SQIVWSPIAQ GVLTGKYPPG QPPPAGSRAT GETGSTFISR
LLRDDVLTAV QELRPIAADA GLSMAQLAVA WVLQNDNVAS AIIGASRPEQ VRENVKAAGV
TLDTALLDRI DDVLAEVVTR A