| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3114 |
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| Symbol | trpD |
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| ID | 3904240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3685741 |
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| End bp | 3686904 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637880435 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_482200 |
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| Protein GI | 86741800 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.586066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.5944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG TTGGCGCATC CCACTCCCAC ACCGGCCGCT CCCCCGCCGG GGCGTCCCCC
GCCGGGGCTC TCCCGACCGC CGGGACGAGC TGGCCGGAGC TGATAGGAGC ATTGCTAGCG
GGCGAGTCCC TGGACTCCGC GCGCACCGCC TGGGCGATGC AGCAGATCAT GGCGGGGGTC
GCCTCGCCCG CGCAGGTGGC CGGGTTCGCG GTGGCGCTGC GGTCCAAAGG GGAGACGCCG
GAGGAGATCG CCGGCCTGGT AGAGGCCATG CTGGCCAGTG CCACGCCCCT GAGCCTGTCC
GAGCGGGTAC GGGCCCGCGC CGTGGACACC TGCGGGACCG GTGGCGACCG TTCCCACACC
GTGAACCTGT CGACGATGGC CGCGCTGGTC GTTGCCGGCG CGGGTGTGCC GGTGGTCAAG
CACGGAAACC GGGCCGCGTC GTCATCCTGC GGCTCGGCGG ACCTGCTCGC GGAGCTCGGT
GTCGTGGTCG ACCTGTCGCC GTCCGGCGTC GAGGCGTGCC TGGCTACGGC CGGCATCGCC
TTCTGCTTCG CCCAGGTCTT CCACCCGGCG ATGCGGCACG TCGGCGGGGT CCGGCGCGAG
ATCGGCGTGC CCACCGCGTT CAACATCCTC GGGCCGCTGA GCAACCCGGC CCGCCCCGGC
GCGCAGGCAA TCGGCGTCGC CGACGCGCGG CTCGCTCCCG TCGTCGCCGG GGTGCTGGCG
GACCGGGGCA CCCGGGCGCT GGTGTTCCGC GGCGACGACG GGCTCGACGA GCTCACCCCG
GTGACGACGT CCGCCGTGTG GGTCGTCGCG GCCGGCGCCG GACAGCCGCG CCGCGAGCGG
TTCGACCCCC GCGACGTCGG CATCCACGTC GCGGACCACG CCGCGCTGCG CGGCGCGGAC
GCCCGTTACA ACGCCGCCGT CACCCGGTCG GTGCTCGCCG GTGAGCCCGG ACCCGTCCGC
GACGCGGTCC TGCTCGCCGC CGCCACCGCC CTGGTCGCCG CGGCCGGCCC CTCCGATGCC
CCCGTCACCG AGCAGATCGC CGCCGCCCTG CCCCGGGCGG CCGAGGCGGT GGACTCCGGT
GCCGCCCGGG CCGTCCTGGA GCGCTGGGTG ACCGCGAGCC AGAGCGCCGC AGCGGTTGAC
GCGGCGGCGG CCACGGCTCT CTGA
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| Protein sequence | MTTVGASHSH TGRSPAGASP AGALPTAGTS WPELIGALLA GESLDSARTA WAMQQIMAGV
ASPAQVAGFA VALRSKGETP EEIAGLVEAM LASATPLSLS ERVRARAVDT CGTGGDRSHT
VNLSTMAALV VAGAGVPVVK HGNRAASSSC GSADLLAELG VVVDLSPSGV EACLATAGIA
FCFAQVFHPA MRHVGGVRRE IGVPTAFNIL GPLSNPARPG AQAIGVADAR LAPVVAGVLA
DRGTRALVFR GDDGLDELTP VTTSAVWVVA AGAGQPRRER FDPRDVGIHV ADHAALRGAD
ARYNAAVTRS VLAGEPGPVR DAVLLAAATA LVAAAGPSDA PVTEQIAAAL PRAAEAVDSG
AARAVLERWV TASQSAAAVD AAAATAL
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