| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3112 |
|---|
| Symbol | |
|---|
| ID | 3904238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3684459 |
|---|
| End bp | 3684899 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637880433 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_482198 |
|---|
| Protein GI | 86741798 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.966736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.35423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AGACCGATCT TCGTCTCACT CCGCAGCGGA TGGCCGTGCT GGCGGTGCTG
GCTGCCGCCC GCGACCATCC GACCGCGGCC GAGGTCCACG AGCGGGTGCG GACCGTATCC
CCGGGGATCG GCAGTGCGAC CGTGTACCGC ACACTGGCGT TGCTGGTATC CGCCGGCCGA
GCGCTCGAGC TGAACCTGGG CGACGGCACG GCGGCCCGGT ACGACGCCAA CACGAGTCGT
CACGACCACG TGGTCTGCGA CGGATGCCGT CGGGCGGTCG ATATTGATCA TCCCGTCCTC
GACGGGATGA TGGCCCAGAT CGCGTGTCGC TCGGGATTCG CCATCACCGG GTACGACCTG
CGGTTCCGGG GGCTGTGCCC GGACTGTCAG GCGAACGGCT CCGGCCCGGC CCGCGGCGCG
GCCGGGACCG GCCAACAGTG A
|
|---|
| Protein sequence | MNDQTDLRLT PQRMAVLAVL AAARDHPTAA EVHERVRTVS PGIGSATVYR TLALLVSAGR
ALELNLGDGT AARYDANTSR HDHVVCDGCR RAVDIDHPVL DGMMAQIACR SGFAITGYDL
RFRGLCPDCQ ANGSGPARGA AGTGQQ
|
|---|
| |